Aliases for IQCJ-SCHIP1-AS1 Gene

Subcategory (RNA class) for IQCJ-SCHIP1-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for IQCJ-SCHIP1-AS1 Gene

  • IQCJ-SCHIP1 Readthrough Antisense RNA 1 2 3 5
  • IQCJ-SCHIP1 Readthrough Antisense RNA 1 (Non-Protein Coding) 2 3
  • IQCJ-SCHIP1-AS1 2 168
  • HSALNG0030200 167
  • HSALNG0030198 167
  • NONHSAG036521 92
  • Uaz98 3

External Ids for IQCJ-SCHIP1-AS1 Gene

Previous GeneCards Identifiers for IQCJ-SCHIP1-AS1 Gene

  • GC03M159484
  • GC03M159765
  • GC03M159707

Summaries for IQCJ-SCHIP1-AS1 Gene

GeneCards Summary for IQCJ-SCHIP1-AS1 Gene

IQCJ-SCHIP1-AS1 (IQCJ-SCHIP1 Readthrough Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with IQCJ-SCHIP1-AS1 include Retinitis Pigmentosa 13.

Additional gene information for IQCJ-SCHIP1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for IQCJ-SCHIP1-AS1 Gene

Genomics for IQCJ-SCHIP1-AS1 Gene

GeneHancer (GH) Regulatory Elements for IQCJ-SCHIP1-AS1 Gene

Promoters and enhancers for IQCJ-SCHIP1-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around IQCJ-SCHIP1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IQCJ-SCHIP1-AS1 Gene

Genomic Locations for IQCJ-SCHIP1-AS1 Gene
chr3:159,731,650-159,768,938
(GRCh38/hg38)
Size:
37,289 bases
Orientation:
Minus strand
chr3:159,483,176-159,486,401
(GRCh37/hg19)
Size:
3,226 bases
Orientation:
Minus strand

Genomic View for IQCJ-SCHIP1-AS1 Gene

Genes around IQCJ-SCHIP1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IQCJ-SCHIP1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IQCJ-SCHIP1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IQCJ-SCHIP1-AS1 Gene

Proteins for IQCJ-SCHIP1-AS1 Gene

Post-translational modifications for IQCJ-SCHIP1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IQCJ-SCHIP1-AS1 Gene

Domains & Families for IQCJ-SCHIP1-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for IQCJ-SCHIP1-AS1 Gene

Function for IQCJ-SCHIP1-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IQCJ-SCHIP1-AS1 Gene

Localization for IQCJ-SCHIP1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IQCJ-SCHIP1-AS1 Gene

Pathways & Interactions for IQCJ-SCHIP1-AS1 Gene

PathCards logo

SuperPathways for IQCJ-SCHIP1-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for IQCJ-SCHIP1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for IQCJ-SCHIP1-AS1 Gene

Drugs & Compounds for IQCJ-SCHIP1-AS1 Gene

No Compound Related Data Available

Transcripts for IQCJ-SCHIP1-AS1 Gene

mRNA/cDNA for IQCJ-SCHIP1-AS1 Gene

14 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
5 LncBook transcripts :
12 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for IQCJ-SCHIP1-AS1 Gene

No ASD Table

Relevant External Links for IQCJ-SCHIP1-AS1 Gene

GeneLoc Exon Structure for
IQCJ-SCHIP1-AS1

Expression for IQCJ-SCHIP1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IQCJ-SCHIP1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for IQCJ-SCHIP1-AS1 Gene

This gene is overexpressed in Testis (x18.7) and Brain - Spinal cord (cervical c-1) (x5.3).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for IQCJ-SCHIP1-AS1

genes like me logo Genes that share expression patterns with IQCJ-SCHIP1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IQCJ-SCHIP1-AS1 Gene

Orthologs for IQCJ-SCHIP1-AS1 Gene

Evolution for IQCJ-SCHIP1-AS1 Gene

ENSEMBL:
Gene Tree for IQCJ-SCHIP1-AS1 (if available)
TreeFam:
Gene Tree for IQCJ-SCHIP1-AS1 (if available)

No data available for Orthologs for IQCJ-SCHIP1-AS1 Gene

Paralogs for IQCJ-SCHIP1-AS1 Gene

No data available for Paralogs for IQCJ-SCHIP1-AS1 Gene

Variants for IQCJ-SCHIP1-AS1 Gene

Additional dbSNP identifiers (rs#s) for IQCJ-SCHIP1-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for IQCJ-SCHIP1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2726108 CNV deletion 23290073
esv3598373 CNV loss 21293372

Additional Variant Information for IQCJ-SCHIP1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IQCJ-SCHIP1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for IQCJ-SCHIP1-AS1 Gene

Disorders for IQCJ-SCHIP1-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for IQCJ-SCHIP1-AS1 Gene - From: DISEASES

Disorder Aliases PubMed IDs
retinitis pigmentosa 13
  • rp13
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for IQCJ-SCHIP1-AS1

genes like me logo Genes that share disorders with IQCJ-SCHIP1-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for IQCJ-SCHIP1-AS1 Gene

Publications for IQCJ-SCHIP1-AS1 Gene

  1. Long non-coding RNA IQCJ-SCHIP1 antisense RNA 1 is downregulated in colorectal cancer and inhibits cell proliferation. (PMID: 31205916) Zhang J … Huang Z (Annals of translational medicine 2019) 2 3 54

Products for IQCJ-SCHIP1-AS1 Gene

Sources for IQCJ-SCHIP1-AS1 Gene