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Aliases for IQCA1-AS1 Gene

Subcategory (RNA class) for IQCA1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for IQCA1-AS1 Gene

  • IQCA1 Antisense RNA 1 2 3 5

External Ids for IQCA1-AS1 Gene

Summaries for IQCA1-AS1 Gene

GeneCards Summary for IQCA1-AS1 Gene

IQCA1-AS1 (IQCA1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for IQCA1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IQCA1-AS1 Gene

Genomics for IQCA1-AS1 Gene

GeneHancer (GH) Regulatory Elements for IQCA1-AS1 Gene

Promoters and enhancers for IQCA1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J236391 Enhancer 0.2 Ensembl 600.7 +0.5 527 0.4 GC02P236392 IQCA1-AS1 RPL3P5 IQCA1
GH02J236544 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 5.5 +156.1 156075 5.5 SP1 NKRF ZNF687 RELA CREM ZBED1 IKZF1 POLR2A BACH1 IKZF2 IQCA1 IQCA1-AS1 LOC105373991 ACKR3
GH02J236549 Enhancer 0.9 ENCODE dbSUPER 5.4 +161.0 161034 4.3 SP1 ZNF687 RELA CREM ZBED1 IKZF1 IKZF2 SMAD5 TRIM22 PKNOX1 LOC105373991 IQCA1 IQCA1-AS1 ACKR3
GH02J236554 Enhancer 0.5 Ensembl dbSUPER 5.1 +164.5 164514 1.2 PKNOX1 LOC105373991 IQCA1 IQCA1-AS1 GC02P236569 ACKR3
GH02J236541 Enhancer 0.2 FANTOM5 4.5 +150.7 150743 0.1 IQCA1 IQCA1-AS1 ACKR3 LOC105373991
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around IQCA1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IQCA1-AS1 Gene

Genomic Locations for IQCA1-AS1 Gene
chr2:236,391,074-236,392,388
(GRCh38/hg38)
Size:
1,315 bases
Orientation:
Plus strand
chr2:237,299,717-237,301,031
(GRCh37/hg19)
Size:
1,315 bases
Orientation:
Plus strand

Genomic View for IQCA1-AS1 Gene

Genes around IQCA1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IQCA1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IQCA1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for IQCA1-AS1 Gene

Proteins for IQCA1-AS1 Gene

Post-translational modifications for IQCA1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IQCA1-AS1 Gene

Domains & Families for IQCA1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IQCA1-AS1 Gene

Function for IQCA1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IQCA1-AS1 Gene

Localization for IQCA1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IQCA1-AS1 Gene

Pathways & Interactions for IQCA1-AS1 Gene

PathCards logo

SuperPathways for IQCA1-AS1 Gene

No Data Available

Interacting Proteins for IQCA1-AS1 Gene

Gene Ontology (GO) - Biological Process for IQCA1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IQCA1-AS1 Gene

Drugs & Compounds for IQCA1-AS1 Gene

No Compound Related Data Available

Transcripts for IQCA1-AS1 Gene

mRNA/cDNA for IQCA1-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for IQCA1-AS1 Gene

No ASD Table

Relevant External Links for IQCA1-AS1 Gene

GeneLoc Exon Structure for
IQCA1-AS1
ECgene alternative splicing isoforms for
IQCA1-AS1

Expression for IQCA1-AS1 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IQCA1-AS1 Gene

Orthologs for IQCA1-AS1 Gene

Evolution for IQCA1-AS1 Gene

ENSEMBL:
Gene Tree for IQCA1-AS1 (if available)
TreeFam:
Gene Tree for IQCA1-AS1 (if available)

No data available for Orthologs for IQCA1-AS1 Gene

Paralogs for IQCA1-AS1 Gene

No data available for Paralogs for IQCA1-AS1 Gene

Variants for IQCA1-AS1 Gene

Additional Variant Information for IQCA1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IQCA1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IQCA1-AS1 Gene

Disorders for IQCA1-AS1 Gene

No disorders were found for IQCA1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IQCA1-AS1 Gene

Publications for IQCA1-AS1 Gene

No publications were found for IQCA1-AS1 Gene.

No data available for External Links for IQCA1-AS1 Gene

Products for IQCA1-AS1 Gene

Sources for IQCA1-AS1 Gene

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