Aliases for INTS9-AS1 Gene

Subcategory (RNA class) for INTS9-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for INTS9-AS1 Gene

  • INTS9 Antisense RNA 1 2 3 5
  • INTS9-AS1 2 5 165
  • ENST00000520055 2
  • NONHSAG049859.2 91
  • HSALNG0064248 164

External Ids for INTS9-AS1 Gene

Summaries for INTS9-AS1 Gene

GeneCards Summary for INTS9-AS1 Gene

INTS9-AS1 (INTS9 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for INTS9-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for INTS9-AS1 Gene

Genomics for INTS9-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for INTS9-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around INTS9-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for INTS9-AS1 Gene

Genomic Locations for INTS9-AS1 Gene
chr8:28,798,142-28,802,085
(GRCh38/hg38)
Size:
3,944 bases
Orientation:
Plus strand
chr8:28,655,659-28,656,986
(GRCh37/hg19)
Size:
1,328 bases
Orientation:
Plus strand

Genomic View for INTS9-AS1 Gene

Genes around INTS9-AS1 on UCSC Golden Path with GeneCards custom track
INTS9-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
INTS9-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for INTS9-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for INTS9-AS1 Gene

Proteins for INTS9-AS1 Gene

Post-translational modifications for INTS9-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for INTS9-AS1 Gene

Domains & Families for INTS9-AS1 Gene

Gene Families for INTS9-AS1 Gene

genes like me logo Genes that share domains with INTS9-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for INTS9-AS1 Gene

Function for INTS9-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for INTS9-AS1 Gene

Localization for INTS9-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for INTS9-AS1 Gene

Pathways & Interactions for INTS9-AS1 Gene

PathCards logo

SuperPathways for INTS9-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for INTS9-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for INTS9-AS1 Gene

Drugs & Compounds for INTS9-AS1 Gene

No Compound Related Data Available

Transcripts for INTS9-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for INTS9-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000477623_9606 lncRNA 548 4

Ensembl: ENST00000520055 (view in UCSC) ,

LncBook: HSALNT0134663,

LNCipedia: INTS9-AS1:3,

NONCODE: NONHSAT125765.2,

URS0000DBA91E_9606 lncRNA 2125 2

HGNC: 53139,

Ensembl: ENST00000648646 (view in UCSC) ,

INTS9-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for INTS9-AS1 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for INTS9-AS1 Gene

No ASD Table

Relevant External Links for INTS9-AS1 Gene

GeneLoc Exon Structure for
INTS9-AS1

Expression for INTS9-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for INTS9-AS1 Gene

Orthologs for INTS9-AS1 Gene

Evolution for INTS9-AS1 Gene

ENSEMBL:
Gene Tree for INTS9-AS1 (if available)
TreeFam:
Gene Tree for INTS9-AS1 (if available)

No data available for Orthologs for INTS9-AS1 Gene

Paralogs for INTS9-AS1 Gene

No data available for Paralogs for INTS9-AS1 Gene

Variants for INTS9-AS1 Gene

Additional Variant Information for INTS9-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
INTS9-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for INTS9-AS1 Gene

Disorders for INTS9-AS1 Gene

No disorders were found for INTS9-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for INTS9-AS1 Gene

Publications for INTS9-AS1 Gene

  1. Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls. (PMID: 27816668) Long W … Ding H (Clinica chimica acta; international journal of clinical chemistry 2016) 2 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

Products for INTS9-AS1 Gene

Sources for INTS9-AS1 Gene