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Aliases for INTS6L-AS1 Gene

Subcategory (RNA class) for INTS6L-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for INTS6L-AS1 Gene

  • INTS6L Antisense RNA 1 2 3 5
  • DDX26B Antisense RNA 1 (Non-Protein Coding) 2 3
  • DDX26B Antisense RNA 1 2
  • DDX26B-AS1 3

External Ids for INTS6L-AS1 Gene

Previous HGNC Symbols for INTS6L-AS1 Gene

  • DDX26B-AS1

Summaries for INTS6L-AS1 Gene

GeneCards Summary for INTS6L-AS1 Gene

INTS6L-AS1 (INTS6L Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for INTS6L-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for INTS6L-AS1 Gene

Genomics for INTS6L-AS1 Gene

GeneHancer (GH) Regulatory Elements for INTS6L-AS1 Gene

Promoters and enhancers for INTS6L-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI135519 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 550.8 -1.3 -1332 5 PKNOX1 SMAD1 ARNT SIN3A YY1 POLR2B ZNF766 ZNF143 KLF13 SP3 INTS6L INTS6L-AS1 ZNF75D PIR34853
GH0XI135527 Enhancer 0.4 ENCODE 0.4 -7.5 -7507 0.9 IKZF1 E2F5 HMBOX1 INTS6L INTS6L-AS1 PIR34853
GH0XI135544 Enhancer 0.5 ENCODE 0.3 -23.5 -23457 0.2 CTCF ESRRA ZNF580 ZEB2 ZNF24 INTS6L INTS6L-AS1 PIR34853
GH0XI135545 Enhancer 0.4 Ensembl 0.3 -23.9 -23927 0.4 CTCF ZNF341 ZNF24 INTS6L INTS6L-AS1 PIR34853
GH0XI135536 Enhancer 0.2 ENCODE 0.4 -16.4 -16384 0.7 INTS6L INTS6L-AS1 PIR34853
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around INTS6L-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for INTS6L-AS1 Gene

Genomic Locations for INTS6L-AS1 Gene
chrX:135,520,083-135,520,674
(GRCh38/hg38)
Size:
592 bases
Orientation:
Minus strand
chrX:134,654,008-134,654,599
(GRCh37/hg19)

Genomic View for INTS6L-AS1 Gene

Genes around INTS6L-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
INTS6L-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for INTS6L-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for INTS6L-AS1 Gene

Proteins for INTS6L-AS1 Gene

Post-translational modifications for INTS6L-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for INTS6L-AS1 Gene

Domains & Families for INTS6L-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for INTS6L-AS1 Gene

Function for INTS6L-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for INTS6L-AS1 Gene

Localization for INTS6L-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for INTS6L-AS1 Gene

Pathways & Interactions for INTS6L-AS1 Gene

SuperPathways for INTS6L-AS1 Gene

No Data Available

Interacting Proteins for INTS6L-AS1 Gene

Gene Ontology (GO) - Biological Process for INTS6L-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for INTS6L-AS1 Gene

Drugs & Compounds for INTS6L-AS1 Gene

No Compound Related Data Available

Transcripts for INTS6L-AS1 Gene

mRNA/cDNA for INTS6L-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for INTS6L-AS1 Gene

No ASD Table

Relevant External Links for INTS6L-AS1 Gene

GeneLoc Exon Structure for
INTS6L-AS1
ECgene alternative splicing isoforms for
INTS6L-AS1

Expression for INTS6L-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for INTS6L-AS1 Gene

Orthologs for INTS6L-AS1 Gene

Evolution for INTS6L-AS1 Gene

ENSEMBL:
Gene Tree for INTS6L-AS1 (if available)
TreeFam:
Gene Tree for INTS6L-AS1 (if available)

No data available for Orthologs for INTS6L-AS1 Gene

Paralogs for INTS6L-AS1 Gene

No data available for Paralogs for INTS6L-AS1 Gene

Variants for INTS6L-AS1 Gene

Sequence variations from dbSNP and Humsavar for INTS6L-AS1 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1002619335 -- 135,521,835(-) C/T upstream_transcript_variant
rs1006464864 -- 135,521,424(-) G/A upstream_transcript_variant
rs1007530789 -- 135,519,851(-) A/G downstream_transcript_variant
rs1008082452 -- 135,520,317(-) C/A non_coding_transcript_variant
rs1011628214 -- 135,522,426(-) G/C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for INTS6L-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv522205 CNV gain 19592680
esv2758895 CNV gain+loss 17122850

Additional Variant Information for INTS6L-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
INTS6L-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for INTS6L-AS1 Gene

Disorders for INTS6L-AS1 Gene

No disorders were found for INTS6L-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for INTS6L-AS1 Gene

Publications for INTS6L-AS1 Gene

No publications were found for INTS6L-AS1 Gene.

Products for INTS6L-AS1 Gene

Sources for INTS6L-AS1 Gene

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