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Aliases for INTS4P1 Gene

Aliases for INTS4P1 Gene

  • Integrator Complex Subunit 4 Pseudogene 1 2 3 5
  • Integrator Complex Subunit 4-Like 1 2 3
  • INTS4L1 3

External Ids for INTS4P1 Gene

Previous HGNC Symbols for INTS4P1 Gene

  • INTS4L1

Summaries for INTS4P1 Gene

GeneCards Summary for INTS4P1 Gene

INTS4P1 (Integrator Complex Subunit 4 Pseudogene 1) is a Pseudogene.

Additional gene information for INTS4P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for INTS4P1 Gene

Genomics for INTS4P1 Gene

GeneHancer (GH) Regulatory Elements for INTS4P1 Gene

Promoters and enhancers for INTS4P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I065140 Promoter 0.9 Ensembl 550.8 -0.1 -131 0.6 BCOR MAZ ZNF335 RLF ZNF24 ZSCAN29 ZBTB26 ZBTB20 INTS4P1 LOC441239 ZNF117 VKORC1L1 LOC101929360
GH07I064995 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 33.8 -139.1 -139147 11.8 MLX DMAP1 YY1 E2F8 ZNF143 SP3 NFYC MEF2D SSRP1 RCOR2 ERV3-1 GTF2IP14 CCT6P3 INTS4P1 ZNF117 CCT6P1 VKORC1L1 ZNF736 ENSG00000227113 EEF1DP4
GH07I065037 Promoter/Enhancer 1.3 Ensembl ENCODE 31.8 -101.9 -101913 2.9 HDAC1 TAF9B RB1 NFRKB KLF17 SIN3A YY1 ZNF335 POLR2B EGR1 CCT6P3 ENSG00000239985 LOC105375330 LOC441241 GTF2IP14 INTS4P1 VKORC1L1 ZNF117 GC07P065067
GH07I065080 Enhancer 1.1 Ensembl ENCODE 33.4 -59.9 -59909 1.8 HDGF PKNOX1 ATF1 ARID4B SIN3A DMAP1 ZNF2 BRCA1 ZNF48 YY1 GTF2IP14 INTS4P1 CCT6P3 ZNF117 ZNF273 ERV3-1 ENSG00000227113
GH07I065034 Enhancer 0.8 Ensembl ENCODE 32.6 -106.3 -106338 0.6 ZNF316 IKZF1 MAFG ZBTB33 BCL6 TRIM24 PPARG EMSY RARA INTS4P1 CCT6P3 LOC105375330 LOC105375329
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around INTS4P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for INTS4P1 Gene

Genomic Locations for INTS4P1 Gene
chr7:65,141,032-65,234,216
(GRCh38/hg38)
Size:
93,185 bases
Orientation:
Plus strand
chr7:64,601,603-64,694,600
(GRCh37/hg19)

Genomic View for INTS4P1 Gene

Genes around INTS4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
INTS4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for INTS4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for INTS4P1 Gene

Proteins for INTS4P1 Gene

Post-translational modifications for INTS4P1 Gene

No Post-translational modifications

Other Protein References for INTS4P1 Gene

No data available for DME Specific Peptides for INTS4P1 Gene

Domains & Families for INTS4P1 Gene

Suggested Antigen Peptide Sequences for INTS4P1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for INTS4P1 Gene

Function for INTS4P1 Gene

Phenotypes for INTS4P1 Gene

genes like me logo Genes that share phenotypes with INTS4P1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for INTS4P1 Gene

Localization for INTS4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for INTS4P1 Gene

Pathways & Interactions for INTS4P1 Gene

SuperPathways for INTS4P1 Gene

No Data Available

Interacting Proteins for INTS4P1 Gene

Gene Ontology (GO) - Biological Process for INTS4P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for INTS4P1 Gene

Drugs & Compounds for INTS4P1 Gene

No Compound Related Data Available

Transcripts for INTS4P1 Gene

mRNA/cDNA for INTS4P1 Gene

(5) REFSEQ mRNAs :
(10) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for INTS4P1 Gene

No ASD Table

Relevant External Links for INTS4P1 Gene

GeneLoc Exon Structure for
INTS4P1
ECgene alternative splicing isoforms for
INTS4P1

Expression for INTS4P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for INTS4P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of INTS4P1 Gene:

INTS4P1
genes like me logo Genes that share expression patterns with INTS4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for INTS4P1 Gene

Orthologs for INTS4P1 Gene

Evolution for INTS4P1 Gene

ENSEMBL:
Gene Tree for INTS4P1 (if available)
TreeFam:
Gene Tree for INTS4P1 (if available)

No data available for Orthologs for INTS4P1 Gene

Paralogs for INTS4P1 Gene

No data available for Paralogs for INTS4P1 Gene

Variants for INTS4P1 Gene

Sequence variations from dbSNP and Humsavar for INTS4P1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000088624 -- 65,194,810(+) A/G intron_variant
rs1000155734 -- 65,151,449(+) T/C intron_variant
rs1000272021 -- 65,151,061(+) T/C intron_variant
rs1000373471 -- 65,180,028(+) A/G intron_variant
rs1000383861 -- 65,163,173(+) T/C intron_variant

Additional Variant Information for INTS4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
INTS4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for INTS4P1 Gene

Disorders for INTS4P1 Gene

Additional Disease Information for INTS4P1

No disorders were found for INTS4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for INTS4P1 Gene

Publications for INTS4P1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for INTS4P1 Gene

Sources for INTS4P1 Gene

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