Aliases for INKA2-AS1 Gene

Subcategory (RNA class) for INKA2-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for INKA2-AS1 Gene

  • INKA2 Antisense RNA 1 2 3 5
  • INKA2-AS1 2 5 165
  • FAM212B Antisense RNA 1 2 3
  • NONHSAG002418.2 91
  • HSALNG0006073 164
  • FAM212B-AS1 3

External Ids for INKA2-AS1 Gene

Previous HGNC Symbols for INKA2-AS1 Gene

  • FAM212B-AS1

Summaries for INKA2-AS1 Gene

GeneCards Summary for INKA2-AS1 Gene

INKA2-AS1 (INKA2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with INKA2-AS1 include Endometrial Cancer and Retinitis Pigmentosa 11.

Additional gene information for INKA2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for INKA2-AS1 Gene

Genomics for INKA2-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs


GeneHancers around INKA2-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for INKA2-AS1 Gene

Genomic Locations for INKA2-AS1 Gene
chr1:111,738,607-111,753,545
(GRCh38/hg38)
Size:
14,939 bases
Orientation:
Plus strand
chr1:112,282,463-112,290,420
(GRCh37/hg19)
Size:
7,958 bases
Orientation:
Plus strand

Genomic View for INKA2-AS1 Gene

Genes around INKA2-AS1 on UCSC Golden Path with GeneCards custom track
INKA2-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
INKA2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for INKA2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for INKA2-AS1 Gene

Proteins for INKA2-AS1 Gene

Post-translational modifications for INKA2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for INKA2-AS1 Gene

Domains & Families for INKA2-AS1 Gene

Gene Families for INKA2-AS1 Gene

genes like me logo Genes that share domains with INKA2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for INKA2-AS1 Gene

Function for INKA2-AS1 Gene

Phenotypes From GWAS Catalog for INKA2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for INKA2-AS1 Gene

Localization for INKA2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for INKA2-AS1 Gene

Pathways & Interactions for INKA2-AS1 Gene

PathCards logo

SuperPathways for INKA2-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for INKA2-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for INKA2-AS1 Gene

Drugs & Compounds for INKA2-AS1 Gene

No Compound Related Data Available

Transcripts for INKA2-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for INKA2-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000001A4F7_9606 lncRNA 2131 5

HGNC: 49446,

RefSeq: NR_038951,

LncBook: HSALNT0012692, HSALNT0012694,

LNCipedia: INKA2-AS1:21,

NONCODE: NONHSAT005201.2,

URS000075D988_9606 lncRNA 1976 4

RefSeq: NR_038952,

LncBook: HSALNT0012695,

LNCipedia: INKA2-AS1:22,

NONCODE: NONHSAT005200.2,

URS0000264D33_9606 lncRNA 779 3

Ensembl: ENST00000524935 (view in UCSC) ,

LncBook: HSALNT0012696, HSALNT0012697,

LNCipedia: INKA2-AS1:23,

URS0000EEEB6A_9606 lncRNA 2393 1

Ensembl: ENST00000658759 (view in UCSC) ,

URS0000EEC7B3_9606 lncRNA 2240 1

Ensembl: ENST00000430373 (view in UCSC) ,

INKA2-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for INKA2-AS1 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for INKA2-AS1 Gene

No ASD Table

Relevant External Links for INKA2-AS1 Gene

GeneLoc Exon Structure for
INKA2-AS1

Expression for INKA2-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for INKA2-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for INKA2-AS1 Gene

Orthologs for INKA2-AS1 Gene

Evolution for INKA2-AS1 Gene

ENSEMBL:
Gene Tree for INKA2-AS1 (if available)
TreeFam:
Gene Tree for INKA2-AS1 (if available)

No data available for Orthologs for INKA2-AS1 Gene

Paralogs for INKA2-AS1 Gene

No data available for Paralogs for INKA2-AS1 Gene

Variants for INKA2-AS1 Gene

Additional dbSNP identifiers (rs#s) for INKA2-AS1 Gene

Additional Variant Information for INKA2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
INKA2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for INKA2-AS1 Gene

Disorders for INKA2-AS1 Gene

MalaCards: The human disease database

(3) MalaCards diseases for INKA2-AS1 Gene - From: LncRNADisease and DISEASES

Disorder Aliases PubMed IDs
endometrial cancer
  • endometrial cancer, familial
retinitis pigmentosa 11
  • rp11
retinitis pigmentosa
  • retinitis pigmentosa 1
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with INKA2-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for INKA2-AS1 Gene

Publications for INKA2-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

Products for INKA2-AS1 Gene

Sources for INKA2-AS1 Gene