Aliases for INHBA-AS1 Gene

Subcategory (RNA class) for INHBA-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for INHBA-AS1 Gene

  • INHBA Antisense RNA 1 2 3 5
  • INHBA Antisense RNA 1 (Non-Protein Coding) 2 3
  • INHBA-AS1 2 168
  • NONHSAG047432 92
  • NONHSAG047433 92
  • HSALNG0057479 167

External Ids for INHBA-AS1 Gene

Previous GeneCards Identifiers for INHBA-AS1 Gene

  • GC07P041735

Summaries for INHBA-AS1 Gene

GeneCards Summary for INHBA-AS1 Gene

INHBA-AS1 (INHBA Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with INHBA-AS1 include Gastric Cancer.

Additional gene information for INHBA-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for INHBA-AS1 Gene

Genomics for INHBA-AS1 Gene

GeneHancer (GH) Regulatory Elements for INHBA-AS1 Gene

Promoters and enhancers for INHBA-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J041693 Enhancer 0.7 ENCODE dbSUPER 500.7 -0.4 -406 0.2 EP300 REST CTCF CEBPB JUND RAD21 RXRA MAX HNF4A PRDM10 INHBA-AS1 piR-35914 INHBA lnc-INHBA-1 lnc-SUGCT-7
GH07J041572 Enhancer 1 Ensembl ENCODE dbSUPER 11.2 -119.1 -119134 4.5 ZNF217 JUND FOS CUX1 EP300 CTBP1 ESRRA FOXA2 MBD2 ESR1 INHBA-AS1 INHBA HSALNG0057472 piR-35002-085
GH07J041134 Enhancer 1.1 FANTOM5 Ensembl ENCODE 9.4 -559.6 -559583 2.2 EP300 ZNF10 RELA BCL11A NFIC CBFB POLR2A SRF ARNT NBN INHBA-AS1 INHBA LOC105375241 LINC01449
GH07J041577 Enhancer 0.9 Ensembl ENCODE dbSUPER 10.7 -114.0 -113987 4.2 FOS EZH2 FOXA1 JUND GATA2 JUN GATA3 TCF7L2 MAX POLR2A INHBA-AS1 INHBA HSALNG0057472 piR-35002-085
GH07J041026 Enhancer 0.9 Ensembl ENCODE 10.2 -665.0 -664983 4.2 JUND FOS EP300 OSR2 WT1 CREB1 ZNF263 SMARCC1 SMARCC2 BRCA1 HSALNG0057442 INHBA INHBA-AS1 HSALNG0057441
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around INHBA-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for INHBA-AS1 Gene

Genomic Locations for INHBA-AS1 Gene
chr7:41,693,884-41,779,388
(GRCh38/hg38)
Size:
85,505 bases
Orientation:
Plus strand
chr7:41,733,514-41,818,986
(GRCh37/hg19)
Size:
85,473 bases
Orientation:
Plus strand

Genomic View for INHBA-AS1 Gene

Genes around INHBA-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
INHBA-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for INHBA-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for INHBA-AS1 Gene

Proteins for INHBA-AS1 Gene

Post-translational modifications for INHBA-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for INHBA-AS1 Gene

Domains & Families for INHBA-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for INHBA-AS1 Gene

Function for INHBA-AS1 Gene

Phenotypes From GWAS Catalog for INHBA-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for INHBA-AS1 Gene

Localization for INHBA-AS1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for INHBA-AS1 gene
Compartment Confidence
extracellular 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for INHBA-AS1 Gene

Pathways & Interactions for INHBA-AS1 Gene

PathCards logo

SuperPathways for INHBA-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for INHBA-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for INHBA-AS1 Gene

Drugs & Compounds for INHBA-AS1 Gene

No Compound Related Data Available

Transcripts for INHBA-AS1 Gene

mRNA/cDNA for INHBA-AS1 Gene

22 RNACentral transcripts :
2 REFSEQ mRNAs :
3 NCBI additional mRNA sequence :
7 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
2 LncBook transcripts :
14 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for INHBA-AS1 Gene

No ASD Table

Relevant External Links for INHBA-AS1 Gene

GeneLoc Exon Structure for
INHBA-AS1

Expression for INHBA-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for INHBA-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for INHBA-AS1 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x7.9), Brain - Amygdala (x7.6), Brain - Hippocampus (x6.5), Brain - Putamen (basal ganglia) (x4.9), Brain - Caudate (basal ganglia) (x4.5), and Brain - Anterior cingulate cortex (BA24) (x4.4).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for INHBA-AS1

SOURCE GeneReport for Unigene cluster for INHBA-AS1 Gene:

Hs.656869
genes like me logo Genes that share expression patterns with INHBA-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for INHBA-AS1 Gene

Orthologs for INHBA-AS1 Gene

Evolution for INHBA-AS1 Gene

ENSEMBL:
Gene Tree for INHBA-AS1 (if available)
TreeFam:
Gene Tree for INHBA-AS1 (if available)

No data available for Orthologs for INHBA-AS1 Gene

Paralogs for INHBA-AS1 Gene

No data available for Paralogs for INHBA-AS1 Gene

Variants for INHBA-AS1 Gene

Additional dbSNP identifiers (rs#s) for INHBA-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for INHBA-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2671244 CNV deletion 23128226
esv2675161 CNV deletion 23128226
esv3612948 CNV loss 21293372
nsv1129782 CNV tandem duplication 24896259
nsv1132960 CNV insertion 24896259
nsv477841 CNV novel sequence insertion 20440878

Additional Variant Information for INHBA-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
INHBA-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for INHBA-AS1 Gene

Disorders for INHBA-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for INHBA-AS1 Gene - From: LncRNADisease and DISEASES

Disorder Aliases PubMed IDs
gastric cancer
  • gastric cancer, somatic
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for INHBA-AS1

genes like me logo Genes that share disorders with INHBA-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for INHBA-AS1 Gene

Publications for INHBA-AS1 Gene

  1. The combination of circulating long noncoding RNAs AK001058, INHBA-AS1, MIR4435-2HG, and CEBPA-AS1 fragments in plasma serve as diagnostic markers for gastric cancer. (PMID: 28423525) Ke D … Zheng X (Oncotarget 2017) 2 3 54
  2. Genome-wide association studies of pit-and-fissure- and smooth-surface caries in permanent dentition. (PMID: 23470693) Zeng Z … Marazita ML (Journal of dental research 2013) 3 54
  3. Genome-wide meta-analysis identifies new susceptibility loci for migraine. (PMID: 23793025) Anttila V … Palotie A (Nature genetics 2013) 3 54
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for INHBA-AS1 Gene

Sources for INHBA-AS1 Gene