Aliases for IL6-AS1 Gene

Subcategory (RNA class) for IL6-AS1 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for IL6-AS1 Gene

  • IL6 Antisense RNA 1 2 3
  • Novel Transcript 5
  • NONHSAG047090 94
  • HSALNG0056615 169
  • Lnc-TOMM7-1 170
  • AC073072.1 5

External Ids for IL6-AS1 Gene

Summaries for IL6-AS1 Gene

GeneCards Summary for IL6-AS1 Gene

IL6-AS1 (IL6 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for IL6-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for IL6-AS1 Gene

Genomics for IL6-AS1 Gene

GeneHancer (GH) Regulatory Elements for IL6-AS1 Gene

Promoters and enhancers for IL6-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around IL6-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IL6-AS1 Gene

Genomic Locations for IL6-AS1 Gene
chr7:22,725,395-22,727,621
(GRCh38/hg38)
Size:
2,227 bases
Orientation:
Minus strand
chr7:22,765,014-22,767,239
(GRCh37/hg19)
Size:
2,226 bases
Orientation:
Minus strand

Genomic View for IL6-AS1 Gene

Genes around IL6-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL6-AS1 Gene

Proteins for IL6-AS1 Gene

Post-translational modifications for IL6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IL6-AS1 Gene

Domains & Families for IL6-AS1 Gene

Suggested Antigen Peptide Sequences for IL6-AS1 Gene

GenScript: Design optimal peptide antigens:
  • LOC541472 protein (Q8N6X1_HUMAN)

No data available for Gene Families , Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for IL6-AS1 Gene

Function for IL6-AS1 Gene

Phenotypes From GWAS Catalog for IL6-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IL6-AS1 Gene

Localization for IL6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IL6-AS1 Gene

Pathways & Interactions for IL6-AS1 Gene

PathCards logo

SuperPathways for IL6-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for IL6-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IL6-AS1 Gene

Drugs & Compounds for IL6-AS1 Gene

No Compound Related Data Available

Transcripts for IL6-AS1 Gene

mRNA/cDNA for IL6-AS1 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNACentral transcripts :
(2) NONCODE transcripts :
(1) LNCipedia transcripts :
(1) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for IL6-AS1 Gene

No ASD Table

Relevant External Links for IL6-AS1 Gene

GeneLoc Exon Structure for
IL6-AS1
ECgene alternative splicing isoforms for
IL6-AS1

Expression for IL6-AS1 Gene

SOURCE GeneReport for Unigene cluster for IL6-AS1 Gene:

Hs.512234
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IL6-AS1 Gene

Orthologs for IL6-AS1 Gene

Evolution for IL6-AS1 Gene

ENSEMBL:
Gene Tree for IL6-AS1 (if available)
TreeFam:
Gene Tree for IL6-AS1 (if available)

No data available for Orthologs for IL6-AS1 Gene

Paralogs for IL6-AS1 Gene

No data available for Paralogs for IL6-AS1 Gene

Variants for IL6-AS1 Gene

Sequence variations from dbSNP and Humsavar for IL6-AS1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1002148681 -- 22,727,152(-) T/C intron_variant
rs1002676051 -- 22,727,603(-) T/C non_coding_transcript_variant
rs1002746567 -- 22,725,521(-) C/G/T non_coding_transcript_variant
rs1003092646 -- 22,725,239(-) A/G downstream_transcript_variant
rs1004035389 -- 22,727,862(-) C/A upstream_transcript_variant

Additional Variant Information for IL6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IL6-AS1 Gene

Disorders for IL6-AS1 Gene

No disorders were found for IL6-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IL6-AS1 Gene

Publications for IL6-AS1 Gene

  1. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) Oláh J … Ovádi J (The Journal of biological chemistry 2011) 3 56
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56

No data available for External Links for IL6-AS1 Gene

Products for IL6-AS1 Gene

Sources for IL6-AS1 Gene