This gene encodes a component of the interleukin 1 receptor complex, which initiates signalling events that result in the activation of interleukin 1-responsive genes. Alternative splicing of this gene results in membrane-bound and soluble isoforms differing in their C-terminus. The ratio of soluble to membrane-bound forms increases during acute-phase induction or stress. [prov... See more...

Aliases for IL1RAP Gene

Aliases for IL1RAP Gene

  • Interleukin 1 Receptor Accessory Protein 2 3 5
  • IL-1RAcP 2 3 4
  • C3orf13 2 3 4
  • IL1R3 2 3 4
  • Interleukin-1 Receptor Accessory Protein 3 4
  • IL-1 Receptor Accessory Protein 3 4
  • Interleukin-1 Receptor 3 3 4
  • Interleukin-1 Receptor Accessory Protein Beta 3
  • EC 3.2.2.6 4
  • IL-1R-3 4
  • IL1RAP 5
  • IL-1R3 4

External Ids for IL1RAP Gene

Previous GeneCards Identifiers for IL1RAP Gene

  • GC03P187234
  • GC03P191494
  • GC03P191633
  • GC03P191552
  • GC03P191714
  • GC03P190231
  • GC03P187631

Summaries for IL1RAP Gene

Entrez Gene Summary for IL1RAP Gene

  • This gene encodes a component of the interleukin 1 receptor complex, which initiates signalling events that result in the activation of interleukin 1-responsive genes. Alternative splicing of this gene results in membrane-bound and soluble isoforms differing in their C-terminus. The ratio of soluble to membrane-bound forms increases during acute-phase induction or stress. [provided by RefSeq, Jul 2018]

GeneCards Summary for IL1RAP Gene

IL1RAP (Interleukin 1 Receptor Accessory Protein) is a Protein Coding gene. Diseases associated with IL1RAP include Marginal Corneal Ulcer and Indolent Myeloma. Among its related pathways are Bacterial infections in CF airways and IL-1 signaling pathway. Gene Ontology (GO) annotations related to this gene include obsolete signal transducer activity and interleukin-1 receptor activity. An important paralog of this gene is IL1RAPL2.

UniProtKB/Swiss-Prot Summary for IL1RAP Gene

  • Coreceptor for IL1RL2 in the IL-36 signaling system (By similarity). Coreceptor with IL1R1 in the IL-1 signaling system. Associates with IL1R1 bound to IL1B to form the high affinity interleukin-1 receptor complex which mediates interleukin-1-dependent activation of NF-kappa-B and other pathways. Signaling involves the recruitment of adapter molecules such as TOLLIP, MYD88, and IRAK1 or IRAK2 via the respective TIR domains of the receptor/coreceptor subunits. Recruits TOLLIP to the signaling complex. Does not bind to interleukin-1 alone; binding of IL1RN to IL1R1, prevents its association with IL1R1 to form a signaling complex. The cellular response is modulated through a non-signaling association with the membrane IL1R2 decoy receptor. Coreceptor for IL1RL1 in the IL-33 signaling system. Can bidirectionally induce pre- and postsynaptic differentiation of neurons by trans-synaptically binding to PTPRD (By similarity). May play a role in IL1B-mediated costimulation of IFNG production from T-helper 1 (Th1) cells (Probable).
  • [Isoform 2]: Associates with secreted ligand-bound IL1R2 and increases the affinity of secreted IL1R2 for IL1B; this complex formation may be the dominant mechanism for neutralization of IL1B by secreted/soluble receptors (PubMed:12530978). Enhances the ability of secreted IL1R1 to inhibit IL-33 signaling (By similarity).
  • [Isoform 4]: Unable to mediate canonical IL-1 signaling (PubMed:19481478). Required for Src phosphorylation by IL1B. May be involved in IL1B-potentiated NMDA-induced calcium influx in neurons (By similarity).

Gene Wiki entry for IL1RAP Gene

No data available for CIViC Summary , Tocris Summary , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for IL1RAP Gene

Genomics for IL1RAP Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for IL1RAP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J190512 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +1.5 1522 5.5 CEBPG HNRNPL GATAD2A CTCF NFKBIZ ZNF692 RCOR2 ZNF7 BACH1 LARP7 IL1RAP lnc-CLDN16-4 lnc-CLDN16-5 TMEM207 CCDC50 GMNC
GH03J190616 Promoter/Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 23.5 +103.7 103710 3.3 RFX1 PKNOX1 FOXK2 RFX3 FOXA2 EP300 CTCF BMI1 SAP130 SPI1 IL1RAP GCNT1P3 lnc-CLDN16-7 HSALNG0031565 GMNC
GH03J190565 Enhancer 1.3 Ensembl ENCODE dbSUPER 11.4 +52.8 52822 3.1 GATAD2A ATF7 PRDM10 ZNF629 TFE3 SOX13 NFKBIZ ZNF692 RCOR2 ZNF7 IL1RAP HSALNG0031565 GCNT1P3 lnc-CLDN16-7 GMNC
GH03J190584 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.7 +73.5 73450 5.8 CREB1 TEAD4 PRDM10 ZNF629 PRDM1 ZSCAN4 POLR2A SP1 ZNF600 ATF7 IL1RAP HSALNG0031565 GCNT1P3 lnc-CLDN16-7 GMNC
GH03J190594 Enhancer 0.7 Ensembl ENCODE dbSUPER 19.5 +82.4 82351 3.7 GATAD2A ZFP64 HNF4A IL1RAP GCNT1P3 lnc-CLDN16-7 HSALNG0031565 GMNC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around IL1RAP on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for IL1RAP

Top Transcription factor binding sites by QIAGEN in the IL1RAP gene promoter:
  • AML1a
  • Egr-4
  • FOXJ2
  • FOXJ2 (long isoform)
  • FOXO1a
  • ITF-2
  • Lhx3a
  • LHX3b
  • MRF-2
  • Tal-1beta

Genomic Locations for IL1RAP Gene

Genomic Locations for IL1RAP Gene
chr3:190,514,051-190,659,750
(GRCh38/hg38)
Size:
145,700 bases
Orientation:
Plus strand
chr3:190,231,840-190,375,843
(GRCh37/hg19)
Size:
144,004 bases
Orientation:
Plus strand

Genomic View for IL1RAP Gene

Genes around IL1RAP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL1RAP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL1RAP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL1RAP Gene

Proteins for IL1RAP Gene

  • Protein details for IL1RAP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NPH3-IL1AP_HUMAN
    Recommended name:
    Interleukin-1 receptor accessory protein
    Protein Accession:
    Q9NPH3
    Secondary Accessions:
    • B1NLD0
    • D3DNW0
    • O14915
    • Q86WJ7

    Protein attributes for IL1RAP Gene

    Size:
    570 amino acids
    Molecular mass:
    65418 Da
    Quaternary structure:
    • The interleukin-36 receptor complex is a heterodimer of IL1RL2 and IL1RAP; the association is inhibited by IL36RN (By similarity). The interleukin-1 receptor complex is a heterodimer of IL1R1 and IL1RAP. Associates with IL1R2 to form a non-signaling interleukin-1 receptor complex. Isoform 4 interacts with IL1R1 in an interleukin-1-dependent manner. Interacts with IL-33-bound IL1RL1 to form the minimal interleukin-33 signaling complex with a 1:1:1 stoichiometry. Interacts with KIT (independently of stimulation with KITLG/SCF). A mast cell-specific KITLG/SCF-induced interleukin-33 signaling complex contains IL1RL1, IL1RAP, KIT and MYD88 (By similarity). Interacts (via the first immunoglobilin domain) with PTPRD (via the third immunoglobilin domain); induces pre- and postsynaptic differentiation of neurons (By similarity).
    Miscellaneous:
    • [Isoform 3]: May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay.

    Three dimensional structures from OCA and Proteopedia for IL1RAP Gene

    Alternative splice isoforms for IL1RAP Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for IL1RAP Gene

Post-translational modifications for IL1RAP Gene

  • Glycosylation at Asn57, Asn107, Asn111, Asn118, Asn196, Asn209, and Asn299
  • Modification sites at PhosphoSitePlus
  • Glycosylation from GlyConnect
    • IL1AP_HUMAN (1425)

No data available for DME Specific Peptides for IL1RAP Gene

Domains & Families for IL1RAP Gene

Gene Families for IL1RAP Gene

HGNC:
Human Protein Atlas (HPA):
  • Plasma proteins
  • Predicted intracellular proteins
  • Predicted membrane proteins
  • Predicted secreted proteins

Protein Domains for IL1RAP Gene

InterPro:
Blocks:
  • Interleukin-1 receptor type I and type II family signature
  • Interleukin-1 receptor type I family signature
ProtoNet:

Suggested Antigen Peptide Sequences for IL1RAP Gene

GenScript: Design optimal peptide antigens:
  • Interleukin-1 receptor 3 (IL1AP_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q9NPH3

UniProtKB/Swiss-Prot:

IL1AP_HUMAN :
  • The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.
  • Belongs to the interleukin-1 receptor family.
Domain:
  • The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.
Family:
  • Belongs to the interleukin-1 receptor family.
genes like me logo Genes that share domains with IL1RAP: view

Function for IL1RAP Gene

Molecular function for IL1RAP Gene

UniProtKB/Swiss-Prot Function:
Coreceptor for IL1RL2 in the IL-36 signaling system (By similarity). Coreceptor with IL1R1 in the IL-1 signaling system. Associates with IL1R1 bound to IL1B to form the high affinity interleukin-1 receptor complex which mediates interleukin-1-dependent activation of NF-kappa-B and other pathways. Signaling involves the recruitment of adapter molecules such as TOLLIP, MYD88, and IRAK1 or IRAK2 via the respective TIR domains of the receptor/coreceptor subunits. Recruits TOLLIP to the signaling complex. Does not bind to interleukin-1 alone; binding of IL1RN to IL1R1, prevents its association with IL1R1 to form a signaling complex. The cellular response is modulated through a non-signaling association with the membrane IL1R2 decoy receptor. Coreceptor for IL1RL1 in the IL-33 signaling system. Can bidirectionally induce pre- and postsynaptic differentiation of neurons by trans-synaptically binding to PTPRD (By similarity). May play a role in IL1B-mediated costimulation of IFNG production from T-helper 1 (Th1) cells (Probable).
UniProtKB/Swiss-Prot Function:
[Isoform 2]: Associates with secreted ligand-bound IL1R2 and increases the affinity of secreted IL1R2 for IL1B; this complex formation may be the dominant mechanism for neutralization of IL1B by secreted/soluble receptors (PubMed:12530978). Enhances the ability of secreted IL1R1 to inhibit IL-33 signaling (By similarity).
UniProtKB/Swiss-Prot Function:
[Isoform 4]: Unable to mediate canonical IL-1 signaling (PubMed:19481478). Required for Src phosphorylation by IL1B. May be involved in IL1B-potentiated NMDA-induced calcium influx in neurons (By similarity).
UniProtKB/Swiss-Prot CatalyticActivity:
Reaction=H2O + NAD(+) = ADP-D-ribose + H(+) + nicotinamide; Xref=Rhea:RHEA:16301, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:17154, ChEBI:CHEBI:57540, ChEBI:CHEBI:57967; EC=3.2.2.6; Evidence={ECO:0000255|PROSITE-ProRule:PRU00204};.
UniProtKB/Swiss-Prot Induction:
Isoform 1 is down-regulated by phorbol ester treatment. Isoform 2 is induced by phorbol ester treatment.
GENATLAS Biochemistry:
interleukin 1,receptor accessory protein,required for the recruitment of IRAK(1) to the interleukin 1 receptor complex,after induction by IL1A or IL1B

Enzyme Numbers (IUBMB) for IL1RAP Gene

Phenotypes From GWAS Catalog for IL1RAP Gene

Gene Ontology (GO) - Molecular Function for IL1RAP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002114 interleukin-33 receptor activity IEA --
GO:0004908 interleukin-1 receptor activity IBA 21873635
GO:0005149 interleukin-1 receptor binding IBA 21873635
GO:0005515 protein binding IEA --
GO:0016787 hydrolase activity IEA --
genes like me logo Genes that share ontologies with IL1RAP: view
genes like me logo Genes that share phenotypes with IL1RAP: view

Animal Models for IL1RAP Gene

MGI Knock Outs for IL1RAP:

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for IL1RAP

Clone Products

No data available for Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for IL1RAP Gene

Localization for IL1RAP Gene

Subcellular locations from UniProtKB/Swiss-Prot for IL1RAP Gene

[Isoform 1]: Cell membrane. Single-pass type I membrane protein.
[Isoform 2]: Secreted.
[Isoform 3]: Secreted.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for IL1RAP gene
Compartment Confidence
plasma membrane 5
extracellular 5
nucleus 2
cytosol 2
cytoskeleton 1
mitochondrion 1
peroxisome 1
endoplasmic reticulum 1
endosome 1
lysosome 1
golgi apparatus 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytosol (2)
  • Vesicles (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for IL1RAP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
GO:0005886 plasma membrane TAS --
GO:0005887 integral component of plasma membrane TAS 7775431
GO:0016020 membrane IEA,HDA 19946888
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with IL1RAP: view

Pathways & Interactions for IL1RAP Gene

PathCards logo

SuperPathways for IL1RAP Gene

SuperPathway Contained pathways
1 Toll-Like receptor Signaling Pathways
.41
2 IL-1 signaling pathway
3 Bacterial infections in CF airways
.78
.78
.43
4 Cytokine Signaling in Immune system
5 PEDF Induced Signaling
genes like me logo Genes that share pathways with IL1RAP: view

Pathways by source for IL1RAP Gene

5 GeneGo (Thomson Reuters) pathways for IL1RAP Gene
  • Bacterial infections in CF airways
  • IL-1 beta-dependent CFTR expression
  • Immune response Bacterial infections in normal airways
  • Immune response IL-1 signaling pathway
  • Transcription_NF-kB signaling pathway
1 Qiagen pathway for IL1RAP Gene
  • IL-1 Pathway

SIGNOR curated interactions for IL1RAP Gene

Activates:
Inactivates:
Is activated by:

Gene Ontology (GO) - Biological Process for IL1RAP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002376 immune system process IEA --
GO:0006954 inflammatory response TAS,IEA --
GO:0006955 immune response TAS 9065432
GO:0007165 signal transduction IEA --
GO:0019221 cytokine-mediated signaling pathway TAS --
genes like me logo Genes that share ontologies with IL1RAP: view

Drugs & Compounds for IL1RAP Gene

(23) Drugs for IL1RAP Gene - From: ClinicalTrials and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Cisplatin Approved Pharma Inhibits DNA synthesis,chemotherapy drug, Potent pro-apoptotic anticancer agent; activates caspase-3, Platinum 3412
Gemcitabine Approved Pharma Ribonucleotide reductase and DNA synthesis inhibitor, Nucleoside Analogs 2451
Paclitaxel Approved, Vet_approved Pharma Tubulin and Bcl2 inhibitor, Taxanes 3701
Albumin-Bound Paclitaxel Pharma 3701
Antibodies Pharma 7499

(1) Additional Compounds for IL1RAP Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with IL1RAP: view

Transcripts for IL1RAP Gene

mRNA/cDNA for IL1RAP Gene

9 REFSEQ mRNAs :
22 NCBI additional mRNA sequence :
19 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for IL1RAP

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for IL1RAP Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b · 7c ^ 8a · 8b ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18
SP1: - - - - - - - -
SP2: - - - - - - - - -
SP3: - - - - - - - - -
SP4: - - - - - - - - - -
SP5:
SP6: - - - - - - -
SP7: - -
SP8: - - - - -
SP9: -
SP10:
SP11: -

Relevant External Links for IL1RAP Gene

GeneLoc Exon Structure for
IL1RAP

Expression for IL1RAP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IL1RAP Gene

mRNA differential expression in normal tissues according to GTEx for IL1RAP Gene

This gene is overexpressed in Whole Blood (x10.3) and Liver (x8.4).

Protein differential expression in normal tissues from HIPED for IL1RAP Gene

This gene is overexpressed in Serum (57.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for IL1RAP Gene



Transcriptomic regulation report from SPP (The Signaling Pathways Project) for IL1RAP

SOURCE GeneReport for Unigene cluster for IL1RAP Gene:

Hs.478673

mRNA Expression by UniProt/SwissProt for IL1RAP Gene:

Q9NPH3-IL1AP_HUMAN
Tissue specificity: Detected in liver, skin, placenta, thymus and lung. Isoform 4 is predominantly expressed in brain. Overexpressed on candidate chronic myeloid leukemia (CML) stem cells, hematopoietic stem cells and mononuclear cells of patients with acute myeloid leukemia (AML). Overexpressed in patients with chronic obstructive pulmonary disease (COPD). Expressed in T-helper 1 (Th1) and T-helper 2 (Th2) cell subsets (PubMed:10653850).

Evidence on tissue expression from TISSUES for IL1RAP Gene

  • Liver(4.6)
  • Nervous system(4.5)
  • Skin(4.5)
  • Spleen(2.8)
  • Blood(2.5)
  • Heart(2.5)
  • Lung(2.4)
  • Lymph node(2.3)
  • Bone marrow(2.3)
  • Intestine(2.1)
genes like me logo Genes that share expression patterns with IL1RAP: view

No data available for Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for IL1RAP Gene

Orthologs for IL1RAP Gene

This gene was present in the common ancestor of chordates.

Orthologs for IL1RAP Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia IL1RAP 30 31
  • 99.61 (n)
OneToOne
Dog
(Canis familiaris)
Mammalia IL1RAP 30 31
  • 90.64 (n)
OneToOne
Cow
(Bos Taurus)
Mammalia IL1RAP 30 31
  • 87.43 (n)
OneToOne
Mouse
(Mus musculus)
Mammalia Il1rap 30 17 31
  • 86.33 (n)
OneToOne
Rat
(Rattus norvegicus)
Mammalia Il1rap 30
  • 85.94 (n)
Platypus
(Ornithorhynchus anatinus)
Mammalia IL1RAP 31
  • 64 (a)
OneToOne
Oppossum
(Monodelphis domestica)
Mammalia IL1RAP 31
  • 57 (a)
OneToOne
Chicken
(Gallus gallus)
Aves IL1RAP 30 31
  • 69.76 (n)
OneToOne
Lizard
(Anolis carolinensis)
Reptilia IL1RAP 31
  • 58 (a)
OneToOne
Tropical Clawed Frog
(Silurana tropicalis)
Amphibia il1rap 30
  • 64.5 (n)
Zebrafish
(Danio rerio)
Actinopterygii CABZ01068246.1 31
  • 36 (a)
OneToOne
Species where no ortholog for IL1RAP was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for IL1RAP Gene

ENSEMBL:
Gene Tree for IL1RAP (if available)
TreeFam:
Gene Tree for IL1RAP (if available)
Aminode:
Evolutionary constrained regions (ECRs) for IL1RAP: view image

Paralogs for IL1RAP Gene

(2) SIMAP similar genes for IL1RAP Gene using alignment to 5 proteins:

  • IL1AP_HUMAN
  • C9J1D9_HUMAN
  • C9J9W1_HUMAN
  • C9JT28_HUMAN
  • H7C3W4_HUMAN
genes like me logo Genes that share paralogs with IL1RAP: view

Variants for IL1RAP Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for IL1RAP Gene

SNP ID Clinical significance and condition Chr 03 pos Variation AA Info Type
712519 Benign: not provided 190,656,067(+) G/A SYNONYMOUS_VARIANT
728616 Benign: not provided 190,604,213(+) T/C NON_CODING_TRANSCRIPT_VARIANT,SYNONYMOUS_VARIANT
753656 Likely Benign: not provided 190,604,288(+) G/A NON_CODING_TRANSCRIPT_VARIANT,SYNONYMOUS_VARIANT
778293 Benign: not provided 190,627,396(+) C/T NON_CODING_TRANSCRIPT_VARIANT,SYNONYMOUS_VARIANT
790445 Benign: not provided 190,629,458(+) C/A SYNONYMOUS_VARIANT

Additional dbSNP identifiers (rs#s) for IL1RAP Gene

Structural Variations from Database of Genomic Variants (DGV) for IL1RAP Gene

Variant ID Type Subtype PubMed ID
dgv131n6 CNV deletion 16902084
dgv2661n106 CNV deletion 24896259
esv1000745 CNV deletion 20482838
esv1433093 CNV deletion 17803354
esv1980229 CNV deletion 18987734
esv2440806 CNV deletion 19546169
esv2667728 CNV deletion 23128226
esv2677697 CNV deletion 23128226
esv2726382 CNV deletion 23290073
esv2726383 CNV deletion 23290073
esv3302996 CNV tandem duplication 20981092
esv34194 CNV loss 18971310
esv3563082 CNV deletion 23714750
esv3893843 CNV gain 25118596
esv4162 CNV loss 18987735
esv4944 CNV loss 18987735
esv6677 CNV gain 19470904
nsv1149600 CNV deletion 26484159
nsv829820 CNV gain 17160897
nsv956268 CNV deletion 24416366

Variation tolerance for IL1RAP Gene

Residual Variation Intolerance Score: 30.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.81; 47.60% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for IL1RAP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL1RAP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for IL1RAP Gene

Disorders for IL1RAP Gene

MalaCards: The human disease database

(4) MalaCards diseases for IL1RAP Gene - From: DISEASES

Disorder Aliases PubMed IDs
marginal corneal ulcer
indolent myeloma
  • indolent multiple myeloma
chromosome xp21 deletion syndrome
  • complex glycerol kinase deficiency
muckle-wells syndrome
  • mws
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for IL1RAP

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
Open Targets Platform
genes like me logo Genes that share disorders with IL1RAP: view

No data available for UniProtKB/Swiss-Prot and Genatlas for IL1RAP Gene

Publications for IL1RAP Gene

  1. The human gene encoding the interleukin-1 receptor accessory protein (IL1RAP) maps to chromosome 3q28 by fluorescence in situ hybridization and radiation hybrid mapping. (PMID: 9479509) Dale M … Nicklin MJ (Genomics 1998) 2 3 4 23
  2. A novel alternatively spliced interleukin-1 receptor accessory protein mIL-1RAcP687. (PMID: 17949817) Lu HL … Ting LP (Molecular immunology 2008) 3 4 23
  3. The soluble form of IL-1 receptor accessory protein enhances the ability of soluble type II IL-1 receptor to inhibit IL-1 action. (PMID: 12530978) Smith DE … Sims JE (Immunity 2003) 3 4 23
  4. Expression of alternatively spliced interleukin-1 receptor accessory protein mRNAs is differentially regulated during inflammation and apoptosis. (PMID: 12781872) Jensen LE … Whitehead AS (Cellular signalling 2003) 3 4 23
  5. IL-1 signaling cascade in liver cells and the involvement of a soluble form of the IL-1 receptor accessory protein. (PMID: 10799889) Jensen LE … Whitehead AS (Journal of immunology (Baltimore, Md. : 1950) 2000) 3 4 23

Products for IL1RAP Gene

  • Boster Bio Antibodies for IL1RAP
  • Boster Bio ELISA Kits for IL1RAP

Sources for IL1RAP Gene