Aliases for IL1R1-AS1 Gene

Data sources for IL1R1-AS1 Gene:

Subcategory (RNA class) for IL1R1-AS1 Gene

lncRNA

Aliases for IL1R1-AS1 Gene

External Ids for IL1R1-AS1 Gene

Summaries for IL1R1-AS1 Gene

GeneCards Summary for IL1R1-AS1 Gene

IL1R1-AS1 (IL1R1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for IL1R1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for IL1R1-AS1 Gene

Genomics for IL1R1-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for IL1R1-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around IL1R1-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for IL1R1-AS1 Gene

Latest Assembly
chr2:102,172,620-102,182,108
(GRCh38/hg38)
Size:
9,489 bases
Orientation:
Minus strand

Previous Assembly
chr2:102,789,081-102,798,568
(GRCh37/hg19 by Ensembl)
Size:
9,488 bases
Orientation:
Minus strand

Genomic View for IL1R1-AS1 Gene

Genes around IL1R1-AS1 on UCSC Golden Path with GeneCards custom track
IL1R1-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
IL1R1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL1R1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for IL1R1-AS1 Gene

Proteins for IL1R1-AS1 Gene

Post-translational modifications for IL1R1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IL1R1-AS1 Gene

Domains & Families for IL1R1-AS1 Gene

Gene Families for IL1R1-AS1 Gene

genes like me logo Genes that share domains with IL1R1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for IL1R1-AS1 Gene

Function for IL1R1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IL1R1-AS1 Gene

Localization for IL1R1-AS1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for IL1R1-AS1 gene
Compartment Confidence
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IL1R1-AS1 Gene

Pathways & Interactions for IL1R1-AS1 Gene

PathCards logo

SuperPathways for IL1R1-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for IL1R1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for IL1R1-AS1 Gene

Drugs & Compounds for IL1R1-AS1 Gene

No Compound Related Data Available

Transcripts for IL1R1-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for IL1R1-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000056BD1_9606 lncRNA 385 4

Ensembl: ENST00000428188 (view in UCSC) ,

LncBook: HSALNT0036655,

LNCipedia: IL1R1-AS1:3,

NONCODE: NONHSAT072848.2,

URS0001BE6D91_9606 lncRNA 382 1

LncBook: HSALNT0036655,

IL1R1-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for IL1R1-AS1 Gene

No ASD Table

Relevant External Links for IL1R1-AS1 Gene

GeneLoc Exon Structure for
IL1R1-AS1

No data available for mRNA/cDNA for IL1R1-AS1 Gene

Expression for IL1R1-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IL1R1-AS1 Gene

Orthologs for IL1R1-AS1 Gene

Evolution for IL1R1-AS1 Gene

ENSEMBL:
Gene Tree for IL1R1-AS1 (if available)
TreeFam:
Gene Tree for IL1R1-AS1 (if available)

No data available for Orthologs for IL1R1-AS1 Gene

Paralogs for IL1R1-AS1 Gene

No data available for Paralogs for IL1R1-AS1 Gene

Variants for IL1R1-AS1 Gene

Additional Variant Information for IL1R1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL1R1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IL1R1-AS1 Gene

Disorders for IL1R1-AS1 Gene

No disorders were found for IL1R1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IL1R1-AS1 Gene

Publications for IL1R1-AS1 Gene

  1. SCCA, TSGF, and the Long Non-Coding RNA AC007271.3 are Effective Biomarkers for Diagnosing Oral Squamous Cell Carcinoma. (PMID: 29763905) Shao T … Lv X (Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 2018) 2 3

Products for IL1R1-AS1 Gene

Sources for IL1R1-AS1 Gene