Aliases for IL1R1-AS1 Gene

Subcategory (RNA class) for IL1R1-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for IL1R1-AS1 Gene

  • IL1R1 Antisense RNA 1 2 3 5
  • IL1R1-AS1 2 168
  • HSALNG0017401 167
  • NONHSAG028748 92

External Ids for IL1R1-AS1 Gene

Summaries for IL1R1-AS1 Gene

GeneCards Summary for IL1R1-AS1 Gene

IL1R1-AS1 (IL1R1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for IL1R1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for IL1R1-AS1 Gene

Genomics for IL1R1-AS1 Gene

GeneHancer (GH) Regulatory Elements for IL1R1-AS1 Gene

Promoters and enhancers for IL1R1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J102181 Enhancer 0.6 Ensembl 500.7 +0.2 203 1.4 POLR2G GABPA POLR2A NR2C1 EHMT2 SMAD4 SMARCA4 NR2C2 ZBTB40 AGO2 IL1R1-AS1 RFX8 IL18RAP RF00017-3286
GH02J102139 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11.2 +39.7 39737 5 NRF1 POLR2G POLR2A ZBTB26 REST ZBTB25 TGIF2 CTBP1 SKI ZSCAN9 IL1R1 piR-37824 IL1R1-AS1 CNOT11 IL1RL2 IL18R1 RF00017-3286
GH02J102060 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.2 +118.1 118137 6.2 EP300 TCF12 NRF1 POLR2G NCOR1 NONO JUND FOS KDM6A POLR2A IL1R1 HSALNG0017398 MAP4K4 IL1R1-AS1 IL1R2 IL18R1
GH02J102033 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11 +148.1 148101 2.6 TCF12 SIN3A POLR2G NCOR1 CTCF CUX1 ZBTB25 TGIF2 ZBTB7A SKI IL1R2 IL1R1 IL1RL2 IL1R1-AS1 IL18RAP TBC1D8 MAP4K4 IL18R1 ENSG00000287771 HSALNG0017394
GH02J102103 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 10.3 +76.8 76760 3.7 TCF12 SIN3A JUND FOS EP300 KDM6A TCF7 ZBTB25 TEAD1 ZKSCAN8 IL1R1 IL1R1-AS1 IL1RL1 RF00994-505 piR-37824
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around IL1R1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IL1R1-AS1 Gene

Genomic Locations for IL1R1-AS1 Gene
chr2:102,172,621-102,182,108
(GRCh38/hg38)
Size:
9,488 bases
Orientation:
Minus strand
chr2:102,789,081-102,798,568
(GRCh37/hg19)
Size:
9,488 bases
Orientation:
Minus strand

Genomic View for IL1R1-AS1 Gene

Genes around IL1R1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL1R1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL1R1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for IL1R1-AS1 Gene

Proteins for IL1R1-AS1 Gene

Post-translational modifications for IL1R1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IL1R1-AS1 Gene

Domains & Families for IL1R1-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for IL1R1-AS1 Gene

Function for IL1R1-AS1 Gene

Phenotypes From GWAS Catalog for IL1R1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IL1R1-AS1 Gene

Localization for IL1R1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IL1R1-AS1 Gene

Pathways & Interactions for IL1R1-AS1 Gene

PathCards logo

SuperPathways for IL1R1-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for IL1R1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for IL1R1-AS1 Gene

Drugs & Compounds for IL1R1-AS1 Gene

No Compound Related Data Available

Transcripts for IL1R1-AS1 Gene

mRNA/cDNA for IL1R1-AS1 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for IL1R1-AS1 Gene

No ASD Table

Relevant External Links for IL1R1-AS1 Gene

GeneLoc Exon Structure for
IL1R1-AS1

Expression for IL1R1-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IL1R1-AS1 Gene

Orthologs for IL1R1-AS1 Gene

Evolution for IL1R1-AS1 Gene

ENSEMBL:
Gene Tree for IL1R1-AS1 (if available)
TreeFam:
Gene Tree for IL1R1-AS1 (if available)

No data available for Orthologs for IL1R1-AS1 Gene

Paralogs for IL1R1-AS1 Gene

No data available for Paralogs for IL1R1-AS1 Gene

Variants for IL1R1-AS1 Gene

Additional Variant Information for IL1R1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL1R1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IL1R1-AS1 Gene

Disorders for IL1R1-AS1 Gene

No disorders were found for IL1R1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IL1R1-AS1 Gene

Publications for IL1R1-AS1 Gene

  1. SCCA, TSGF, and the Long Non-Coding RNA AC007271.3 are Effective Biomarkers for Diagnosing Oral Squamous Cell Carcinoma. (PMID: 29763905) Shao T … Lv X (Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 2018) 2 3 54

Products for IL1R1-AS1 Gene

Sources for IL1R1-AS1 Gene