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Aliases for IL10RB-AS1 Gene

Subcategory (RNA class) for IL10RB-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for IL10RB-AS1 Gene

  • IL10RB Antisense RNA 1 (Head To Head) 2 3 5
  • IFNAR2 Antisense RNA 1 2 3
  • IFNAR2-AS1 3

External Ids for IL10RB-AS1 Gene

Previous GeneCards Identifiers for IL10RB-AS1 Gene

  • GC21M034639

Summaries for IL10RB-AS1 Gene

GeneCards Summary for IL10RB-AS1 Gene

IL10RB-AS1 (IL10RB Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for IL10RB-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IL10RB-AS1 Gene

Genomics for IL10RB-AS1 Gene

GeneHancer (GH) Regulatory Elements for IL10RB-AS1 Gene

Promoters and enhancers for IL10RB-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21I033264 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 555.2 -1.7 -1733 6.6 PKNOX1 SMAD1 ZFP64 SIN3A IRF4 POLR2B ZNF207 ZNF143 FOS SP3 IL10RB IL10RB-AS1 C21orf59 IFNAR2 MIS18A-AS1 CRYZL1 PAXBP1-AS1 TMEM50B ENSG00000249624 IFNAR1
GH21I033261 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.8 +4.5 4531 0.9 POLR2A IL10RB IFNAR2 DNAJC28 IL10RB-AS1 ENSG00000249624
GH21I033259 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +6.2 6226 1.5 SAP130 ARID4B MAX BRF2 RAD21 HNF4A FOS MYC MIXL1 IL10RB IFNAR2 SON DNAJC28 IL10RB-AS1 ENSG00000249624
GH21I033252 Enhancer 0.6 dbSUPER 0.4 +11.3 11308 5.4 CEBPB MAFG CEBPG EBF1 BATF ATF2 ZNF316 MYNN ZBTB33 ATF7 IFNAR2 IL10RB DNAJC28 ENSG00000249624 IL10RB-AS1
GH21I033246 Enhancer 0.6 ENCODE dbSUPER 0.4 +18.5 18510 2.1 POLR2A MNT ENSG00000249624 IL10RB IFNAR2 IL10RB-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around IL10RB-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IL10RB-AS1 Gene

Genomic Locations for IL10RB-AS1 Gene
chr21:33,263,873-33,266,260
(GRCh38/hg38)
Size:
2,388 bases
Orientation:
Minus strand
chr21:34,636,178-34,638,565
(GRCh37/hg19)

Genomic View for IL10RB-AS1 Gene

Genes around IL10RB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IL10RB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IL10RB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IL10RB-AS1 Gene

Proteins for IL10RB-AS1 Gene

Post-translational modifications for IL10RB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IL10RB-AS1 Gene

Domains & Families for IL10RB-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IL10RB-AS1 Gene

Function for IL10RB-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IL10RB-AS1 Gene

Localization for IL10RB-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IL10RB-AS1 Gene

Pathways & Interactions for IL10RB-AS1 Gene

SuperPathways for IL10RB-AS1 Gene

No Data Available

Interacting Proteins for IL10RB-AS1 Gene

Gene Ontology (GO) - Biological Process for IL10RB-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IL10RB-AS1 Gene

Drugs & Compounds for IL10RB-AS1 Gene

No Compound Related Data Available

Transcripts for IL10RB-AS1 Gene

mRNA/cDNA for IL10RB-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IL10RB-AS1 Gene

No ASD Table

Relevant External Links for IL10RB-AS1 Gene

GeneLoc Exon Structure for
IL10RB-AS1
ECgene alternative splicing isoforms for
IL10RB-AS1

Expression for IL10RB-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IL10RB-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for IL10RB-AS1 Gene

This gene is overexpressed in Whole Blood (x7.2).
genes like me logo Genes that share expression patterns with IL10RB-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IL10RB-AS1 Gene

Orthologs for IL10RB-AS1 Gene

Evolution for IL10RB-AS1 Gene

ENSEMBL:
Gene Tree for IL10RB-AS1 (if available)
TreeFam:
Gene Tree for IL10RB-AS1 (if available)

No data available for Orthologs for IL10RB-AS1 Gene

Paralogs for IL10RB-AS1 Gene

No data available for Paralogs for IL10RB-AS1 Gene

Variants for IL10RB-AS1 Gene

Sequence variations from dbSNP and Humsavar for IL10RB-AS1 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs45607743 uncertain-significance, Inflammatory bowel disease 33,266,394(-) C/A upstream_transcript_variant
rs556338583 uncertain-significance, Inflammatory bowel disease 33,266,372(-) C/A/T upstream_transcript_variant
rs56368587 uncertain-significance, Inflammatory bowel disease 33,266,392(-) C/A upstream_transcript_variant
rs1000251675 -- 33,265,172(-) T/C downstream_transcript_variant
rs1001350840 -- 33,268,217(-) G/A upstream_transcript_variant

Additional Variant Information for IL10RB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IL10RB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IL10RB-AS1 Gene

Disorders for IL10RB-AS1 Gene

Additional Disease Information for IL10RB-AS1

No disorders were found for IL10RB-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IL10RB-AS1 Gene

Publications for IL10RB-AS1 Gene

  1. Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey SD … DREAM investigators (Diabetes care 2010) 3 58
  2. Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip. (PMID: 19913121) Talmud PJ … BRIGHT Consortium (American journal of human genetics 2009) 3 58
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for IL10RB-AS1 Gene

Sources for IL10RB-AS1 Gene

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