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Aliases for IGLV2-5 Gene

Aliases for IGLV2-5 Gene

  • Immunoglobulin Lambda Variable 2-5 (Pseudogene) 2 3 5
  • Immunoglobulin Lambda Variable 2-5 Pseudogene 2
  • Immunoglobulin Lambda Variable 2-5 2
  • IGLV25 3
  • V1-1P 3

External Ids for IGLV2-5 Gene

Previous GeneCards Identifiers for IGLV2-5 Gene

  • GC22U990170
  • GC22P021523
  • GC22P021528
  • GC22P023201
  • GC22P006166
  • GC22P023205
  • GC22P023208
  • GC22P022857
  • GC22P022861
  • GC22P023515
  • GC22P022933
  • GC22P022982
  • GC22P023039
  • GC22P023127
  • GC22P023185
  • GC22P023367
  • GC22P023420
  • GC22P023471

Summaries for IGLV2-5 Gene

GeneCards Summary for IGLV2-5 Gene

IGLV2-5 (Immunoglobulin Lambda Variable 2-5 (Pseudogene)) is a Pseudogene.

Additional gene information for IGLV2-5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IGLV2-5 Gene

Genomics for IGLV2-5 Gene

GeneHancer (GH) Regulatory Elements for IGLV2-5 Gene

Promoters and enhancers for IGLV2-5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J022855 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 600.7 +0.4 429 4 CC2D1A CTCF GTF2F1 ZNF687 MLLT1 RAD21 ARID2 DPF2 BACH1 IKZF2 GC22P023591 IGLV2-5 IGLV3-4 IGLL5 LOC105372948 IGL
GH22J022783 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 12.5 -68.0 -68026 9.7 HDGF CTCF RAD21 IKZF1 ZNF740 TRIM22 MCM7 NRF1 EP300 ATF1 ENSG00000275772 IGLL5 IGLV3-4 IGLV2-5 IGLV2-11 LOC100420967 IGL
GH22J022926 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 12.8 +75.5 75520 10.9 SP1 CC2D1A GTF2F1 ZNF687 MCM2 ZNF24 MAFK RELA CREM MLLT1 TOP3B IGLV5-52 ENSG00000272578 ENSG00000234630 MIF-AS1 ZNF70 IGLV3-4 IGLV2-5 MMP11 SMARCB1
GH22J022937 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 12.5 +84.4 84436 6.2 ZNF652 ELF3 CC2D1A CTCF CBFA2T2 CEBPG GTF2F1 ZNF687 MCM2 RELA TOP3B MIF-AS1 MMP11 IGLV3-4 IGLV2-5 SMARCB1 ZNF70 IGLC2 RSPH14 CHCHD10
GH22J022770 Enhancer 1.2 Ensembl ENCODE dbSUPER 12.6 -86.4 -86413 1.6 CTCF SP5 RXRA IKZF1 REST RXRB PKNOX1 HDAC1 MTA2 NRF1 IGLV3-12 IGLV3-4 IGLV2-5 GC22P023597 IGL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around IGLV2-5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for IGLV2-5 Gene

Genomic Locations for IGLV2-5 Gene
chr22:22,856,590-22,857,060
(GRCh38/hg38)
Size:
471 bases
Orientation:
Plus strand
chr22:23,198,765-23,199,235
(GRCh37/hg19)
Size:
471 bases
Orientation:
Plus strand

Genomic View for IGLV2-5 Gene

Genes around IGLV2-5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGLV2-5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGLV2-5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGLV2-5 Gene

Proteins for IGLV2-5 Gene

Post-translational modifications for IGLV2-5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGLV2-5 Gene

Domains & Families for IGLV2-5 Gene

Gene Families for IGLV2-5 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IGLV2-5: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IGLV2-5 Gene

Function for IGLV2-5 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGLV2-5 Gene

Localization for IGLV2-5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IGLV2-5 Gene

Pathways & Interactions for IGLV2-5 Gene

PathCards logo

SuperPathways for IGLV2-5 Gene

No Data Available

Interacting Proteins for IGLV2-5 Gene

Gene Ontology (GO) - Biological Process for IGLV2-5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IGLV2-5 Gene

Drugs & Compounds for IGLV2-5 Gene

No Compound Related Data Available

Transcripts for IGLV2-5 Gene

mRNA/cDNA for IGLV2-5 Gene

(2) Additional mRNA sequences :
(97) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for IGLV2-5 Gene

No ASD Table

Relevant External Links for IGLV2-5 Gene

GeneLoc Exon Structure for
IGLV2-5
ECgene alternative splicing isoforms for
IGLV2-5

Expression for IGLV2-5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IGLV2-5 Gene

mRNA differential expression in normal tissues according to GTEx for IGLV2-5 Gene

This gene is overexpressed in Spleen (x15.0) and Whole Blood (x6.2).
genes like me logo Genes that share expression patterns with IGLV2-5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IGLV2-5 Gene

Orthologs for IGLV2-5 Gene

Evolution for IGLV2-5 Gene

ENSEMBL:
Gene Tree for IGLV2-5 (if available)
TreeFam:
Gene Tree for IGLV2-5 (if available)

No data available for Orthologs for IGLV2-5 Gene

Paralogs for IGLV2-5 Gene

No data available for Paralogs for IGLV2-5 Gene

Variants for IGLV2-5 Gene

Additional Variant Information for IGLV2-5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGLV2-5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGLV2-5 Gene

Disorders for IGLV2-5 Gene

Additional Disease Information for IGLV2-5

No disorders were found for IGLV2-5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IGLV2-5 Gene

Publications for IGLV2-5 Gene

  1. The human neonatal B cell response to respiratory syncytial virus uses a biased antibody variable gene repertoire that lacks somatic mutations. (PMID: 19804909) Williams JV … Crowe JE (Molecular immunology 2009) 3 58
  2. The lambda gene immunoglobulin repertoire of human neonatal B cells. (PMID: 17675156) Richl P … Girschick HJ (Molecular immunology 2008) 3 58
  3. Lambda light chain revision in the human intestinal IgA response. (PMID: 18606680) Su W … Spencer J (Journal of immunology (Baltimore, Md. : 1950) 2008) 3 58
  4. Normal V(D)J recombination in cells from patients with Nijmegen breakage syndrome. (PMID: 11282395) Harfst E … Grawunder U (Molecular immunology 2000) 3 58
  5. One-megabase sequence analysis of the human immunoglobulin lambda gene locus. (PMID: 9074928) Kawasaki K … Shimizu N (Genome research 1997) 3 58

Products for IGLV2-5 Gene

Sources for IGLV2-5 Gene

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