Aliases for IGKV2OR2-1 Gene

Aliases for IGKV2OR2-1 Gene

  • Immunoglobulin Kappa Variable 2/OR2-1 (Pseudogene) 2 3 5
  • IGKV2/OR2-1A 2 3
  • IGKV2/OR2-1 2 3
  • Immunoglobulin Kappa Variable 2/OR2-1 Pseudogene 2
  • Immunoglobulin Kappa Variable 2/OR2-1a 3
  • Immunoglobulin Kappa Variable 2/OR2-1 2
  • IGKV2OR2-1A 3
  • IGKV2OR21A 3
  • IGKV2OR2-1 5
  • IGKV2OR21 3

External Ids for IGKV2OR2-1 Gene

Previous HGNC Symbols for IGKV2OR2-1 Gene

  • IGKV2OR2-1A

Previous GeneCards Identifiers for IGKV2OR2-1 Gene

  • GC02U990145
  • GC02P097713

Summaries for IGKV2OR2-1 Gene

GeneCards Summary for IGKV2OR2-1 Gene

IGKV2OR2-1 (Immunoglobulin Kappa Variable 2/OR2-1 (Pseudogene)) is a Pseudogene.

Additional gene information for IGKV2OR2-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for IGKV2OR2-1 Gene

Genomics for IGKV2OR2-1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for IGKV2OR2-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J097047 Enhancer 0.3 Ensembl 600.7 +1.3 1313 1.8 ZIC2 IGKV2OR2-1 lnc-ANKRD36-8 FAHD2B IGKV2OR2-2 FAM178B
GH02J097045 Enhancer 0.3 Ensembl 600.7 -0.6 -587 0.4 ZIC2 IGKV2OR2-1 lnc-ANKRD36-8 FAHD2B lnc-FAHD2B-3 FAM178B
GH02J097049 Enhancer 0.2 Ensembl 0.7 +2.8 2813 0.8 IGKV2OR2-2 lnc-ANKRD36-7 IGKV2OR2-1 lnc-ANKRD36-8 FAHD2B FAM178B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around IGKV2OR2-1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for IGKV2OR2-1 Gene

Genomic Locations for IGKV2OR2-1 Gene
chr2:97,046,588-97,046,891
(GRCh38/hg38)
Size:
304 bases
Orientation:
Plus strand
chr2:97,712,325-97,712,628
(GRCh37/hg19)
Size:
304 bases
Orientation:
Plus strand

Genomic View for IGKV2OR2-1 Gene

Genes around IGKV2OR2-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGKV2OR2-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGKV2OR2-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for IGKV2OR2-1 Gene

Proteins for IGKV2OR2-1 Gene

Post-translational modifications for IGKV2OR2-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGKV2OR2-1 Gene

Domains & Families for IGKV2OR2-1 Gene

Gene Families for IGKV2OR2-1 Gene

genes like me logo Genes that share domains with IGKV2OR2-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for IGKV2OR2-1 Gene

Function for IGKV2OR2-1 Gene

Phenotypes From GWAS Catalog for IGKV2OR2-1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGKV2OR2-1 Gene

Localization for IGKV2OR2-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IGKV2OR2-1 Gene

Pathways & Interactions for IGKV2OR2-1 Gene

PathCards logo

SuperPathways for IGKV2OR2-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for IGKV2OR2-1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for IGKV2OR2-1 Gene

Drugs & Compounds for IGKV2OR2-1 Gene

No Compound Related Data Available

Transcripts for IGKV2OR2-1 Gene

mRNA/cDNA for IGKV2OR2-1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for IGKV2OR2-1 Gene

No ASD Table

Relevant External Links for IGKV2OR2-1 Gene

GeneLoc Exon Structure for
IGKV2OR2-1

Expression for IGKV2OR2-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IGKV2OR2-1 Gene

genes like me logo Genes that share expression patterns with IGKV2OR2-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IGKV2OR2-1 Gene

Orthologs for IGKV2OR2-1 Gene

Evolution for IGKV2OR2-1 Gene

ENSEMBL:
Gene Tree for IGKV2OR2-1 (if available)
TreeFam:
Gene Tree for IGKV2OR2-1 (if available)

No data available for Orthologs for IGKV2OR2-1 Gene

Paralogs for IGKV2OR2-1 Gene

No data available for Paralogs for IGKV2OR2-1 Gene

Variants for IGKV2OR2-1 Gene

Additional Variant Information for IGKV2OR2-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGKV2OR2-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGKV2OR2-1 Gene

Disorders for IGKV2OR2-1 Gene

No disorders were found for IGKV2OR2-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGKV2OR2-1 Gene

Publications for IGKV2OR2-1 Gene

  1. The human immunoglobulin kappa locus: pseudogenes, unique and repetitive sequences. (PMID: 8011175) Schäble K … Zachau HG (Biological chemistry Hoppe-Seyler 1994) 2 3
  2. The human V kappa locus. Characterization of extended immunoglobulin gene regions by cosmid cloning. (PMID: 3037085) Pohlenz HD … Zachau HG (Journal of molecular biology 1987) 3

No data available for Mastermind for IGKV2OR2-1 Gene

Products for IGKV2OR2-1 Gene

Sources for IGKV2OR2-1 Gene