Aliases for IGHV3OR16-13 Gene

Aliases for IGHV3OR16-13 Gene

  • Immunoglobulin Heavy Variable 3/OR16-13 (Non-Functional) 2 3 5 13
  • IGHV3/OR16-13 2 3
  • Immunoglobulin Heavy Variable 3/OR16-13 2
  • IGHV3OR16-13 5
  • IGHV3OR1613 3

External Ids for IGHV3OR16-13 Gene

Previous GeneCards Identifiers for IGHV3OR16-13 Gene

  • GC16U990109
  • GC16P033631

Summaries for IGHV3OR16-13 Gene

GeneCards Summary for IGHV3OR16-13 Gene

IGHV3OR16-13 (Immunoglobulin Heavy Variable 3/OR16-13 (Non-Functional)) is a Pseudogene. An important paralog of this gene is IGHV3-74.

Additional gene information for IGHV3OR16-13 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for IGHV3OR16-13 Gene

Genomics for IGHV3OR16-13 Gene

Genomic Locations for IGHV3OR16-13 Gene

Genomic Locations for IGHV3OR16-13 Gene
chr16:33,827,214-33,827,661
(GRCh38/hg38)
Size:
448 bases
Orientation:
Plus strand
chr16:33,629,681-33,630,128
(GRCh37/hg19)
Size:
448 bases
Orientation:
Plus strand

Genomic View for IGHV3OR16-13 Gene

Genes around IGHV3OR16-13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV3OR16-13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV3OR16-13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV3OR16-13 Gene

No data available for GeneHancer (GH) Regulatory Elements for IGHV3OR16-13 Gene

Proteins for IGHV3OR16-13 Gene

  • Protein details for IGHV3OR16-13 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A075B7E8-A0A075B7E8_HUMAN
    Recommended name:
    Immunoglobulin heavy variable 3/OR16-13 (non-functional)
    Protein Accession:
    A0A075B7E8

    Protein attributes for IGHV3OR16-13 Gene

    Size:
    117 amino acids
    Molecular mass:
    12904 Da
    Quaternary structure:
    No Data Available

neXtProt entry for IGHV3OR16-13 Gene

Post-translational modifications for IGHV3OR16-13 Gene

No Post-translational modifications

Other Protein References for IGHV3OR16-13 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for IGHV3OR16-13 Gene

Domains & Families for IGHV3OR16-13 Gene

Gene Families for IGHV3OR16-13 Gene

Protein Domains for IGHV3OR16-13 Gene

genes like me logo Genes that share domains with IGHV3OR16-13: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for IGHV3OR16-13 Gene

Function for IGHV3OR16-13 Gene

Gene Ontology (GO) - Molecular Function for IGHV3OR16-13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003823 antigen binding IBA --
GO:0034987 immunoglobulin receptor binding IBA --
genes like me logo Genes that share ontologies with IGHV3OR16-13: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV3OR16-13 Gene

Localization for IGHV3OR16-13 Gene

Gene Ontology (GO) - Cellular Components for IGHV3OR16-13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0009897 external side of plasma membrane IBA --
GO:0042571 immunoglobulin complex, circulating IBA --
genes like me logo Genes that share ontologies with IGHV3OR16-13: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for IGHV3OR16-13 Gene

Pathways & Interactions for IGHV3OR16-13 Gene

PathCards logo

SuperPathways for IGHV3OR16-13 Gene

No Data Available

Gene Ontology (GO) - Biological Process for IGHV3OR16-13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006910 phagocytosis, recognition IBA --
GO:0006911 phagocytosis, engulfment IBA --
GO:0006958 complement activation, classical pathway IBA --
GO:0042742 defense response to bacterium IBA --
GO:0045087 innate immune response IBA --
genes like me logo Genes that share ontologies with IGHV3OR16-13: view

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for IGHV3OR16-13 Gene

Drugs & Compounds for IGHV3OR16-13 Gene

No Compound Related Data Available

Transcripts for IGHV3OR16-13 Gene

mRNA/cDNA for IGHV3OR16-13 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV3OR16-13 Gene

No ASD Table

Relevant External Links for IGHV3OR16-13 Gene

GeneLoc Exon Structure for
IGHV3OR16-13

Expression for IGHV3OR16-13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IGHV3OR16-13 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for IGHV3OR16-13

genes like me logo Genes that share expression patterns with IGHV3OR16-13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IGHV3OR16-13 Gene

Orthologs for IGHV3OR16-13 Gene

This gene was present in the common ancestor of mammals.

Orthologs for IGHV3OR16-13 Gene

Organism Taxonomy Gene Similarity Type Details
Dog
(Canis familiaris)
Mammalia -- 31
  • 67 (a)
ManyToMany
Species where no ortholog for IGHV3OR16-13 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for IGHV3OR16-13 Gene

ENSEMBL:
Gene Tree for IGHV3OR16-13 (if available)
TreeFam:
Gene Tree for IGHV3OR16-13 (if available)

Paralogs for IGHV3OR16-13 Gene

genes like me logo Genes that share paralogs with IGHV3OR16-13: view

Variants for IGHV3OR16-13 Gene

Additional Variant Information for IGHV3OR16-13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGHV3OR16-13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV3OR16-13 Gene

Disorders for IGHV3OR16-13 Gene

Additional Disease Information for IGHV3OR16-13

No disorders were found for IGHV3OR16-13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IGHV3OR16-13 Gene

Publications for IGHV3OR16-13 Gene

  1. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J … Pennacchio LA (Nature 2004) 13
  2. Human immunoglobulin VH and D segments on chromosomes 15q11.2 and 16p11.2. (PMID: 7951227) Tomlinson IM … Winter G (Human molecular genetics 1994) 3

Products for IGHV3OR16-13 Gene

Sources for IGHV3OR16-13 Gene