Aliases for IGHV3-47 Gene

Aliases for IGHV3-47 Gene

  • Immunoglobulin Heavy Variable 3-47 (Pseudogene) 2 3 5
  • Immunoglobulin Heavy Variable 3-47 Pseudogene 2
  • Immunoglobulin Heavy Variable 3-47 2
  • IGHV3-47 5
  • IGHV347 3
  • 3-47P 3

External Ids for IGHV3-47 Gene

Previous GeneCards Identifiers for IGHV3-47 Gene

  • GC14U990181
  • GC14M104946
  • GC14M106046
  • GC14M106047
  • GC14M106975
  • GC14M106978
  • GC14M107000
  • GC14M107474
  • GC14M107666
  • GC14M106571
  • GC14M107045
  • GC14M108815
  • GC14M108964
  • GC14M109113
  • GC14M109351
  • GC14M107769
  • GC14M107862
  • GC14M107961
  • GC14M108083
  • GC14M108224
  • GC14M108368
  • GC14M108517
  • GC14M108666

Summaries for IGHV3-47 Gene

GeneCards Summary for IGHV3-47 Gene

IGHV3-47 (Immunoglobulin Heavy Variable 3-47 (Pseudogene)) is a Pseudogene.

Additional gene information for IGHV3-47 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for IGHV3-47 Gene

Genomics for IGHV3-47 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for IGHV3-47 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around IGHV3-47 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for IGHV3-47 Gene

Genomic Locations for IGHV3-47 Gene
chr14:106,518,579-106,519,034
(GRCh38/hg38)
Size:
456 bases
Orientation:
Minus strand
chr14:106,974,506-106,974,961
(GRCh37/hg19)
Size:
456 bases
Orientation:
Minus strand

Genomic View for IGHV3-47 Gene

Genes around IGHV3-47 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IGHV3-47 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IGHV3-47 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IGHV3-47 Gene

Proteins for IGHV3-47 Gene

Post-translational modifications for IGHV3-47 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IGHV3-47 Gene

Domains & Families for IGHV3-47 Gene

Gene Families for IGHV3-47 Gene

genes like me logo Genes that share domains with IGHV3-47: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for IGHV3-47 Gene

Function for IGHV3-47 Gene

Phenotypes From GWAS Catalog for IGHV3-47 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IGHV3-47 Gene

Localization for IGHV3-47 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IGHV3-47 Gene

Pathways & Interactions for IGHV3-47 Gene

PathCards logo

SuperPathways for IGHV3-47 Gene

No Data Available

Gene Ontology (GO) - Biological Process for IGHV3-47 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for IGHV3-47 Gene

Drugs & Compounds for IGHV3-47 Gene

No Compound Related Data Available

Transcripts for IGHV3-47 Gene

mRNA/cDNA for IGHV3-47 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for IGHV3-47 Gene

No ASD Table

Relevant External Links for IGHV3-47 Gene

GeneLoc Exon Structure for
IGHV3-47

Expression for IGHV3-47 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for IGHV3-47 Gene

mRNA differential expression in normal tissues according to GTEx for IGHV3-47 Gene

This gene is overexpressed in Testis (x36.2), Colon - Transverse (x8.4), and Spleen (x8.3).
genes like me logo Genes that share expression patterns with IGHV3-47: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IGHV3-47 Gene

Orthologs for IGHV3-47 Gene

Evolution for IGHV3-47 Gene

ENSEMBL:
Gene Tree for IGHV3-47 (if available)
TreeFam:
Gene Tree for IGHV3-47 (if available)

No data available for Orthologs for IGHV3-47 Gene

Paralogs for IGHV3-47 Gene

No data available for Paralogs for IGHV3-47 Gene

Variants for IGHV3-47 Gene

Additional Variant Information for IGHV3-47 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IGHV3-47

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IGHV3-47 Gene

Disorders for IGHV3-47 Gene

No disorders were found for IGHV3-47 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IGHV3-47 Gene

Publications for IGHV3-47 Gene

  1. Analysis of somatic hypermutation in X-linked hyper-IgM syndrome shows specific deficiencies in mutational targeting. (PMID: 19023113) Longo NS … Lipsky PE (Blood 2009) 3
  2. Origin of nodular lymphocyte-predominant Hodgkin's disease from a clonal expansion of highly mutated germinal-center B cells. (PMID: 9250847) Marafioti T … Stein H (The New England journal of medicine 1997) 3
  3. The repertoire of human germline VH sequences reveals about fifty groups of VH segments with different hypervariable loops. (PMID: 1404388) Tomlinson IM … Winter G (Journal of molecular biology 1992) 3

Products for IGHV3-47 Gene

Sources for IGHV3-47 Gene