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Aliases for IFNA20P Gene

Subcategory (RNA class) for IFNA20P Gene

lncRNA

Aliases for IFNA20P Gene

  • Interferon Alpha 20, Pseudogene 2 3 5
  • Interferon Pseudogene 20 2 3
  • IFNP20 3

External Ids for IFNA20P Gene

ORGUL Members for IFNA20P Gene

Previous HGNC Symbols for IFNA20P Gene

  • IFNP20

Previous GeneCards Identifiers for IFNA20P Gene

  • GC09U901630

Summaries for IFNA20P Gene

GeneCards Summary for IFNA20P Gene

IFNA20P (Interferon Alpha 20, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for IFNA20P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for IFNA20P Gene

Genomics for IFNA20P Gene

GeneHancer (GH) Regulatory Elements for IFNA20P Gene

Promoters and enhancers for IFNA20P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I020619 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.1 -698.9 -698898 5.3 HDGF PKNOX1 ARID4B SIN3A YBX1 FEZF1 ZNF2 YY1 ZNF213 ZNF207 MLLT3 KLHL9 FOCAD IFNA20P RPL7AP48
GH09I021252 Enhancer 0.8 Ensembl ENCODE 5.9 -68.0 -68035 0.7 CTCF PKNOX1 ZNF654 FOXA2 SIN3A RAD21 POLR2A ZNF143 SMC3 RUNX3 IFNA12P IFNA8 IFNWP2 IFNA13 IFNA20P IFNA14 IFNA22P
GH09I021235 Enhancer 0.7 Ensembl ENCODE 5.6 -85.2 -85225 0.7 ZNF664 CTCF ZNF654 TRIM22 SMC3 HNF4A RAD21 IFNA20P IFNA14 IFNWP5
GH09I021503 Enhancer 0.7 Ensembl ENCODE 5.4 +184.8 184787 4.3 MAFF JUN STAT3 CEBPB RCOR1 ZBTB33 EP300 IFNWP2 IFNA8 IFNA12P IFNA20P IFNE GC09P021512 MIR31HG
GH09I021195 Enhancer 0.6 Ensembl 6.2 -125.7 -125722 0.8 CTCF SRF ZNF654 TRIM22 RAD21 ZNF664 SMC3 ZSCAN29 IFNA13 IFNA20P IFNWP9 IFNA7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around IFNA20P on UCSC Golden Path with GeneCards custom track

Genomic Locations for IFNA20P Gene

Genomic Locations for IFNA20P Gene
chr9:21,321,300-21,321,827
(GRCh38/hg38)
Size:
528 bases
Orientation:
Plus strand
chr9:21,321,299-21,321,826
(GRCh37/hg19)

Genomic View for IFNA20P Gene

Genes around IFNA20P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
IFNA20P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IFNA20P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IFNA20P Gene

Proteins for IFNA20P Gene

Post-translational modifications for IFNA20P Gene

No Post-translational modifications

No data available for DME Specific Peptides for IFNA20P Gene

Domains & Families for IFNA20P Gene

Gene Families for IFNA20P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with IFNA20P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for IFNA20P Gene

Function for IFNA20P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IFNA20P Gene

Localization for IFNA20P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IFNA20P Gene

Pathways & Interactions for IFNA20P Gene

SuperPathways for IFNA20P Gene

No Data Available

Interacting Proteins for IFNA20P Gene

Gene Ontology (GO) - Biological Process for IFNA20P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for IFNA20P Gene

Drugs & Compounds for IFNA20P Gene

No Compound Related Data Available

Transcripts for IFNA20P Gene

mRNA/cDNA for IFNA20P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for IFNA20P Gene

No ASD Table

Relevant External Links for IFNA20P Gene

GeneLoc Exon Structure for
IFNA20P
ECgene alternative splicing isoforms for
IFNA20P

Expression for IFNA20P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for IFNA20P Gene

NURSA nuclear receptor signaling pathways regulating expression of IFNA20P Gene:

IFNA20P
genes like me logo Genes that share expression patterns with IFNA20P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IFNA20P Gene

Orthologs for IFNA20P Gene

Evolution for IFNA20P Gene

ENSEMBL:
Gene Tree for IFNA20P (if available)
TreeFam:
Gene Tree for IFNA20P (if available)

No data available for Orthologs for IFNA20P Gene

Paralogs for IFNA20P Gene

No data available for Paralogs for IFNA20P Gene

Variants for IFNA20P Gene

Additional Variant Information for IFNA20P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IFNA20P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IFNA20P Gene

Disorders for IFNA20P Gene

No disorders were found for IFNA20P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for IFNA20P Gene

Publications for IFNA20P Gene

No publications were found for IFNA20P Gene.

Products for IFNA20P Gene

Sources for IFNA20P Gene

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