Aliases for IER3-AS1 Gene

Subcategory (RNA class) for IER3-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for IER3-AS1 Gene

  • IER3 Antisense RNA 1 2 3 5
  • IER3-AS1 2 5 165
  • NONHSAG043431.2 91
  • HSALNG0049194 164

External Ids for IER3-AS1 Gene

Previous GeneCards Identifiers for IER3-AS1 Gene

  • GC06P032347
  • GC06P032538
  • GC06P032691
  • GC06P033512
  • GC06P031070
  • GC06P031218
  • GC06P031431
  • GC06P032099

Summaries for IER3-AS1 Gene

GeneCards Summary for IER3-AS1 Gene

IER3-AS1 (IER3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for IER3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for IER3-AS1 Gene

Genomics for IER3-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for IER3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J030739 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +0.1 115 6.5 ARHGAP35 CEBPG SP1 HNRNPL CREB1 GATAD2A CTCF ZBTB33 TEAD4 PRDM10 FLOT1 HCG20 IER3 IER3-AS1 lnc-IER3-6 MDC1 LY6G5B DDX39B DHX16 GTF2H4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around IER3-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for IER3-AS1 Gene

Genomic Locations for IER3-AS1 Gene
chr6:30,742,791-30,743,905
(GRCh38/hg38)
Size:
1,115 bases
Orientation:
Plus strand
chr6:30,710,706-30,711,369
(GRCh37/hg19)
Size:
664 bases
Orientation:
Plus strand

Genomic View for IER3-AS1 Gene

Genes around IER3-AS1 on UCSC Golden Path with GeneCards custom track
IER3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
IER3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for IER3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for IER3-AS1 Gene

Proteins for IER3-AS1 Gene

Post-translational modifications for IER3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for IER3-AS1 Gene

Domains & Families for IER3-AS1 Gene

Gene Families for IER3-AS1 Gene

genes like me logo Genes that share domains with IER3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for IER3-AS1 Gene

Function for IER3-AS1 Gene

Phenotypes From GWAS Catalog for IER3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for IER3-AS1 Gene

Localization for IER3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for IER3-AS1 Gene

Pathways & Interactions for IER3-AS1 Gene

PathCards logo

SuperPathways for IER3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for IER3-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for IER3-AS1 Gene

Drugs & Compounds for IER3-AS1 Gene

No Compound Related Data Available

Transcripts for IER3-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for IER3-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002771E6_9606 lncRNA 527 3

Ensembl: ENST00000607333 (view in UCSC) ,

LncBook: HSALNT0104058,

LNCipedia: IER3-AS1:12,

URS0000BC43FA_9606 lncRNA 574 2

HGNC: 53629,

RefSeq: NR_149095,

URS00008BDF2E_9606 lncRNA 805 3

LncBook: HSALNT0104055,

LNCipedia: IER3-AS1:9,

NONCODE: NONHSAT108675.2,

URS00009B4EB7_9606 lncRNA 644 2

LncBook: HSALNT0104057,

NONCODE: NONHSAT207082.1,

URS00008BAD6D_9606 lncRNA 417 2

LNCipedia: IER3-AS1:11,

NONCODE: NONHSAT108676.2,

IER3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for IER3-AS1 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for IER3-AS1 Gene

No ASD Table

Relevant External Links for IER3-AS1 Gene

GeneLoc Exon Structure for
IER3-AS1

Expression for IER3-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for IER3-AS1 Gene

Orthologs for IER3-AS1 Gene

Evolution for IER3-AS1 Gene

ENSEMBL:
Gene Tree for IER3-AS1 (if available)
TreeFam:
Gene Tree for IER3-AS1 (if available)

No data available for Orthologs for IER3-AS1 Gene

Paralogs for IER3-AS1 Gene

No data available for Paralogs for IER3-AS1 Gene

Variants for IER3-AS1 Gene

Additional dbSNP identifiers (rs#s) for IER3-AS1 Gene

Additional Variant Information for IER3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
IER3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for IER3-AS1 Gene

Disorders for IER3-AS1 Gene

No disorders were found for IER3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for IER3-AS1 Gene

Publications for IER3-AS1 Gene

No publications were found for IER3-AS1 Gene.

No data available for Mastermind for IER3-AS1 Gene

Products for IER3-AS1 Gene

Sources for IER3-AS1 Gene