Aliases for HTR1DP1 Gene

Aliases for HTR1DP1 Gene

  • 5-Hydroxytryptamine Receptor 1D Pseudogene 1 2 3 5
  • 5-Hydroxytryptamine (Serotonin) Receptor 1D Pseudogene 1 2 3
  • 5-Hydroxytryptamine (Serotonin) Receptor 1D, G Protein-Coupled Pseudogene 3

External Ids for HTR1DP1 Gene

Previous GeneCards Identifiers for HTR1DP1 Gene

  • GC12U990039
  • GC12M001262

Summaries for HTR1DP1 Gene

GeneCards Summary for HTR1DP1 Gene

HTR1DP1 (5-Hydroxytryptamine Receptor 1D Pseudogene 1) is a Pseudogene.

Additional gene information for HTR1DP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HTR1DP1 Gene

Genomics for HTR1DP1 Gene

GeneHancer (GH) Regulatory Elements for HTR1DP1 Gene

Promoters and enhancers for HTR1DP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J001172 Enhancer 1 Ensembl ENCODE 0.4 -18.8 -18764 1.6 ZSCAN5C ZNF639 ZNF10 TRIM28 HES1 OSR2 NCOR1 BCL11A WT1 ZBTB17 WNT5B ENSG00000249028 ENSG00000250132 ERC1 RAD52 HTR1DP1 RF00017-1066
GH12J001129 Enhancer 1 Ensembl ENCODE 0.4 +22.1 22077 3.2 ZSCAN5C ZNF10 TRIM28 FOXA2 NFIC MAFF SMARCC1 FOS MAFK ARNT HSALNG0088523 ENSG00000249028 HTR1DP1 ERC1
GH12J001202 Promoter/Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas 0.2 -51.4 -51447 3.4 ZSCAN5C SP1 ZNF639 ZNF10 KLF7 MEF2C ZNF662 ATF2 ZEB1 OSR2 RAD52 CCDC77 DCP1B ERC1 ENSG00000261799 KDM5A ENSG00000249028 RF00017-1066 HTR1DP1
GH12J001161 Enhancer 0.5 Ensembl 0.4 -8.6 -8641 1 MXI1 OSR2 GATA3 SPI1 RCOR1 SMARCA4 CHD2 GATA2 EZH2 ENSG00000249028 HTR1DP1 RF00017-1066 ERC1
GH12J001216 Enhancer 1 ENCODE CraniofacialAtlas 0.2 -64.5 -64503 1.8 ZSCAN5C JUND FOS ZNF639 TRIM28 EP300 ZNF341 OSR2 BCL11A WT1 ENSG00000249028 WNT5B RF00017-1066 HTR1DP1 ERC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HTR1DP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HTR1DP1 Gene

Genomic Locations for HTR1DP1 Gene
chr12:1,151,810-1,153,059
(GRCh38/hg38)
Size:
1,250 bases
Orientation:
Minus strand
chr12:1,261,423-1,262,203
(GRCh37/hg19)
Size:
781 bases
Orientation:
Minus strand

Genomic View for HTR1DP1 Gene

Genes around HTR1DP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HTR1DP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HTR1DP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HTR1DP1 Gene

Proteins for HTR1DP1 Gene

Post-translational modifications for HTR1DP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HTR1DP1 Gene

Domains & Families for HTR1DP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HTR1DP1 Gene

Function for HTR1DP1 Gene

Molecular function for HTR1DP1 Gene

GENATLAS Biochemistry:
5-hydroxytryptamine (serotonin) receptor,subtype 1D,G protein coupled receptor superfamily,pseudogene

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HTR1DP1 Gene

Localization for HTR1DP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HTR1DP1 Gene

Pathways & Interactions for HTR1DP1 Gene

PathCards logo

SuperPathways for HTR1DP1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for HTR1DP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HTR1DP1 Gene

Drugs & Compounds for HTR1DP1 Gene

No Compound Related Data Available

Transcripts for HTR1DP1 Gene

mRNA/cDNA for HTR1DP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HTR1DP1 Gene

No ASD Table

Relevant External Links for HTR1DP1 Gene

GeneLoc Exon Structure for
HTR1DP1

Expression for HTR1DP1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HTR1DP1 Gene

Orthologs for HTR1DP1 Gene

Evolution for HTR1DP1 Gene

ENSEMBL:
Gene Tree for HTR1DP1 (if available)
TreeFam:
Gene Tree for HTR1DP1 (if available)

No data available for Orthologs for HTR1DP1 Gene

Paralogs for HTR1DP1 Gene

No data available for Paralogs for HTR1DP1 Gene

Variants for HTR1DP1 Gene

Additional Variant Information for HTR1DP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HTR1DP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HTR1DP1 Gene

Disorders for HTR1DP1 Gene

No disorders were found for HTR1DP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HTR1DP1 Gene

Publications for HTR1DP1 Gene

  1. An Alu sequence interrupts a human 5-hydroxytryptamine1D receptor pseudogene. (PMID: 8444354) Nguyen T … O'Dowd BF (Gene 1993) 2 3 54

No data available for Mastermind for HTR1DP1 Gene

Products for HTR1DP1 Gene

Sources for HTR1DP1 Gene