Aliases for HTATSF1P1 Gene

Aliases for HTATSF1P1 Gene

  • HIV-1 Tat Specific Factor 1 Pseudogene 1 2 3 5
  • HIV TAT Specific Factor 1 Pseudogene 2 3
  • DJ1033B10.6 2 3
  • TAT-SF1-L 2 3
  • HIV-1 Tat Specific Factor 1 Pseudogene 2
  • HTATSF1P1 5
  • HTATSF1P 3

External Ids for HTATSF1P1 Gene

Previous HGNC Symbols for HTATSF1P1 Gene

  • HTATSF1P

Previous GeneCards Identifiers for HTATSF1P1 Gene

  • GC06U902038
  • GC06P033255
  • GC06P033322
  • GC06P033326
  • GC06P033329
  • GC06P033524
  • GC06P033261
  • GC06P033265
  • GC06P033267
  • GC06P033269
  • GC06P033297
  • GC06P033302
  • GC06P033312
  • GC06P033318
  • GC06P047374
  • GC06P049415

Summaries for HTATSF1P1 Gene

GeneCards Summary for HTATSF1P1 Gene

HTATSF1P1 (HIV-1 Tat Specific Factor 1 Pseudogene 1) is a Pseudogene.

Additional gene information for HTATSF1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HTATSF1P1 Gene

Genomics for HTATSF1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HTATSF1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J033241 Enhancer 0.4 Ensembl 0.7 +4.0 4002 0.8 BATF JUNB RNF2 RUNX3 DAXX RGL2 HTATSF1P1 ENSG00000272217 RING1 VPS52
GH06J033243 Enhancer 0.2 Ensembl 0.4 +5.9 5902 0.2 ENSG00000272217 HTATSF1P1 VPS52 RING1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HTATSF1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HTATSF1P1 Gene

Latest Assembly
chr6:33,237,799-33,239,690
(GRCh38/hg38)
Size:
1,892 bases
Orientation:
Plus strand

Previous Assembly
chr6:33,205,576-33,207,467
(GRCh37/hg19 by Ensembl)
Size:
1,892 bases
Orientation:
Plus strand

Genomic View for HTATSF1P1 Gene

Genes around HTATSF1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HTATSF1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HTATSF1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for HTATSF1P1 Gene

Proteins for HTATSF1P1 Gene

Post-translational modifications for HTATSF1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HTATSF1P1 Gene

Domains & Families for HTATSF1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HTATSF1P1 Gene

Function for HTATSF1P1 Gene

Phenotypes From GWAS Catalog for HTATSF1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HTATSF1P1 Gene

Localization for HTATSF1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HTATSF1P1 Gene

Pathways & Interactions for HTATSF1P1 Gene

PathCards logo

SuperPathways for HTATSF1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HTATSF1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HTATSF1P1 Gene

Drugs & Compounds for HTATSF1P1 Gene

No Compound Related Data Available

Transcripts for HTATSF1P1 Gene

mRNA/cDNA for HTATSF1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HTATSF1P1 Gene

No ASD Table

Relevant External Links for HTATSF1P1 Gene

GeneLoc Exon Structure for
HTATSF1P1

Expression for HTATSF1P1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HTATSF1P1 Gene

Orthologs for HTATSF1P1 Gene

Evolution for HTATSF1P1 Gene

ENSEMBL:
Gene Tree for HTATSF1P1 (if available)
TreeFam:
Gene Tree for HTATSF1P1 (if available)
Alliance of Genome Resources:
Additional Orthologs for HTATSF1P1

No data available for Orthologs for HTATSF1P1 Gene

Paralogs for HTATSF1P1 Gene

No data available for Paralogs for HTATSF1P1 Gene

Variants for HTATSF1P1 Gene

Additional Variant Information for HTATSF1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HTATSF1P1
Leiden Open Variation Database (LOVD)
HTATSF1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HTATSF1P1 Gene

Disorders for HTATSF1P1 Gene

No disorders were found for HTATSF1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HTATSF1P1 Gene

Publications for HTATSF1P1 Gene

No publications were found for HTATSF1P1 Gene.

Products for HTATSF1P1 Gene

Sources for HTATSF1P1 Gene