Aliases for HSPE1P28 Gene

Aliases for HSPE1P28 Gene

  • Heat Shock Protein Family E (Hsp10) Member 1 Pseudogene 28 2 3 5
  • Heat Shock 10kDa Protein 1 Pseudogene 28 2 3
  • Heat Shock 10kDa Protein 1 (Chaperonin 10) Pseudogene 3
  • EPF5 Pseudogene 3
  • HSPE1P28 5
  • EPF5 3

External Ids for HSPE1P28 Gene

Previous GeneCards Identifiers for HSPE1P28 Gene

  • GC09M115046

Summaries for HSPE1P28 Gene

GeneCards Summary for HSPE1P28 Gene

HSPE1P28 (Heat Shock Protein Family E (Hsp10) Member 1 Pseudogene 28) is a Pseudogene.

Additional gene information for HSPE1P28 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSPE1P28 Gene

Genomics for HSPE1P28 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSPE1P28 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J112271 Enhancer 0.8 Ensembl ENCODE 0.4 +5.1 5107 9.8 PRDM1 ZNF600 SP1 FOXA1 FOXA2 ZNF592 CUX1 FOSL2 ATF4 ATF3 SUSD1 HSDL2 RF00017-7827 RN7SL430P lnc-SUSD1-5 HSPE1P28 lnc-SUSD1-6 PTBP3
GH09J112284 Enhancer 0.3 Ensembl 0.7 -3.6 -3593 0.8 SPI1 HLF SUSD1 HSDL2 HSPE1P28 RF00017-7828 PTBP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSPE1P28 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSPE1P28 Gene

Genomic Locations for HSPE1P28 Gene
chr9:112,280,978-112,281,408
(GRCh38/hg38)
Size:
431 bases
Orientation:
Minus strand
chr9:115,043,258-115,043,688
(GRCh37/hg19)
Size:
431 bases
Orientation:
Minus strand

Genomic View for HSPE1P28 Gene

Genes around HSPE1P28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSPE1P28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSPE1P28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSPE1P28 Gene

Proteins for HSPE1P28 Gene

Post-translational modifications for HSPE1P28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSPE1P28 Gene

Domains & Families for HSPE1P28 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSPE1P28 Gene

Function for HSPE1P28 Gene

Phenotypes From GWAS Catalog for HSPE1P28 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSPE1P28 Gene

Localization for HSPE1P28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSPE1P28 Gene

Pathways & Interactions for HSPE1P28 Gene

PathCards logo

SuperPathways for HSPE1P28 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSPE1P28 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSPE1P28 Gene

Drugs & Compounds for HSPE1P28 Gene

No Compound Related Data Available

Transcripts for HSPE1P28 Gene

mRNA/cDNA for HSPE1P28 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HSPE1P28 Gene

No ASD Table

Relevant External Links for HSPE1P28 Gene

GeneLoc Exon Structure for
HSPE1P28

Expression for HSPE1P28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HSPE1P28 Gene

genes like me logo Genes that share expression patterns with HSPE1P28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSPE1P28 Gene

Orthologs for HSPE1P28 Gene

Evolution for HSPE1P28 Gene

ENSEMBL:
Gene Tree for HSPE1P28 (if available)
TreeFam:
Gene Tree for HSPE1P28 (if available)

No data available for Orthologs for HSPE1P28 Gene

Paralogs for HSPE1P28 Gene

No data available for Paralogs for HSPE1P28 Gene

Variants for HSPE1P28 Gene

Additional Variant Information for HSPE1P28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSPE1P28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSPE1P28 Gene

Disorders for HSPE1P28 Gene

No disorders were found for HSPE1P28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSPE1P28 Gene

Publications for HSPE1P28 Gene

  1. Mapping and characterization of the eukaryotic early pregnancy factor/chaperonin 10 gene family. (PMID: 10763410) Summers KM … Cavanagh AC (Somatic cell and molecular genetics 1998) 3

No data available for Mastermind for HSPE1P28 Gene

Products for HSPE1P28 Gene

Sources for HSPE1P28 Gene