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Aliases for HSPE1P1 Gene

Subcategory (RNA class) for HSPE1P1 Gene

lncRNA

Aliases for HSPE1P1 Gene

  • Heat Shock Protein Family E (Hsp10) Member 1 Pseudogene 1 2 3 5
  • Heat Shock 10kDa Protein 1 Pseudogene 1 2 3
  • Heat Shock 10kDa Protein 1 (Chaperonin 10) Pseudogene 1 3
  • Heat Shock 10kD Protein 1 (Chaperonin 10) Pseudogene 1 3
  • Heat Shock 10kD Protein 1 (Chaperonin 10) Psuedogene 1 2
  • BA101E14.1 3
  • HSPEP1 3

External Ids for HSPE1P1 Gene

ORGUL Members for HSPE1P1 Gene

Previous HGNC Symbols for HSPE1P1 Gene

  • HSPEP1

Previous GeneCards Identifiers for HSPE1P1 Gene

  • GC20M038562

Summaries for HSPE1P1 Gene

GeneCards Summary for HSPE1P1 Gene

HSPE1P1 (Heat Shock Protein Family E (Hsp10) Member 1 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HSPE1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSPE1P1 Gene

Genomics for HSPE1P1 Gene

GeneHancer (GH) Regulatory Elements for HSPE1P1 Gene

Promoters and enhancers for HSPE1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J039910 Enhancer 0.7 Ensembl ENCODE 0.3 +23.2 23238 2.4 NR2F2 MAFK MAX MAFF HSPE1P1 GC20M039827
GH20J039896 Enhancer 0.7 Ensembl ENCODE 0.3 +35.6 35632 1.8 RXRA FOS RAD21 ZBTB21 HNF4A GC20M039827 HSPE1P1
GH20J039939 Enhancer 0.4 Ensembl 0.4 -7.9 -7862 4.2 ZFHX2 ZNF366 EGR2 HSPE1P1 GC20P039952
GH20J039886 Enhancer 0.7 Ensembl ENCODE 0.3 +46.6 46638 2 CTCF RAD21 CREB1 TRIM22 MNT SMARCA5 IKZF1 GC20M039827 HSPE1P1
GH20J039899 Enhancer 0.6 Ensembl ENCODE 0.3 +32.8 32838 2.8 NANOG POU5F1 HSPE1P1 GC20M039827
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSPE1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HSPE1P1 Gene

Genomic Locations for HSPE1P1 Gene
chr20:39,932,922-39,933,239
(GRCh38/hg38)
Size:
318 bases
Orientation:
Minus strand
chr20:38,561,564-38,561,881
(GRCh37/hg19)
Size:
318 bases
Orientation:
Minus strand

Genomic View for HSPE1P1 Gene

Genes around HSPE1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSPE1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSPE1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSPE1P1 Gene

Proteins for HSPE1P1 Gene

Post-translational modifications for HSPE1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSPE1P1 Gene

Domains & Families for HSPE1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSPE1P1 Gene

Function for HSPE1P1 Gene

Phenotypes From GWAS Catalog for HSPE1P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSPE1P1 Gene

Localization for HSPE1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSPE1P1 Gene

Pathways & Interactions for HSPE1P1 Gene

PathCards logo

SuperPathways for HSPE1P1 Gene

No Data Available

Interacting Proteins for HSPE1P1 Gene

Gene Ontology (GO) - Biological Process for HSPE1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSPE1P1 Gene

Drugs & Compounds for HSPE1P1 Gene

No Compound Related Data Available

Transcripts for HSPE1P1 Gene

mRNA/cDNA for HSPE1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for HSPE1P1 Gene

No ASD Table

Relevant External Links for HSPE1P1 Gene

GeneLoc Exon Structure for
HSPE1P1
ECgene alternative splicing isoforms for
HSPE1P1

Expression for HSPE1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HSPE1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of HSPE1P1 Gene:

HSPE1P1
genes like me logo Genes that share expression patterns with HSPE1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSPE1P1 Gene

Orthologs for HSPE1P1 Gene

Evolution for HSPE1P1 Gene

ENSEMBL:
Gene Tree for HSPE1P1 (if available)
TreeFam:
Gene Tree for HSPE1P1 (if available)

No data available for Orthologs for HSPE1P1 Gene

Paralogs for HSPE1P1 Gene

No data available for Paralogs for HSPE1P1 Gene

Variants for HSPE1P1 Gene

Additional Variant Information for HSPE1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSPE1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSPE1P1 Gene

Disorders for HSPE1P1 Gene

Additional Disease Information for HSPE1P1

Genetic Association Database
(GAD)

No disorders were found for HSPE1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HSPE1P1 Gene

Publications for HSPE1P1 Gene

  1. Citalopram and escitalopram plasma drug and metabolite concentrations: genome-wide associations. (PMID: 24528284) Ji Y … Weinshilboum RM (British journal of clinical pharmacology 2014) 3 58
  2. Genome-wide association study does not reveal major genetic determinants for anti-cytomegalovirus antibody response. (PMID: 21993531) Kuparinen T … Hurme M (Genes and immunity 2012) 45 58
  3. Wnt signaling and Dupuytren's disease. (PMID: 21732829) Dolmans GH … BSSH-GODD Consortium (The New England journal of medicine 2011) 45 58
  4. Biological, clinical and population relevance of 95 loci for blood lipids. (PMID: 20686565) Teslovich TM … Kathiresan S (Nature 2010) 45 58
  5. Common variants at 30 loci contribute to polygenic dyslipidemia. (PMID: 19060906) Kathiresan S … Cupples LA (Nature genetics 2009) 45 58

Products for HSPE1P1 Gene

Sources for HSPE1P1 Gene

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