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Aliases for HSPD1P21 Gene

Subcategory (RNA class) for HSPD1P21 Gene

lncRNA

Aliases for HSPD1P21 Gene

  • Heat Shock Protein Family D (Hsp60) Member 1 Pseudogene 21 2 3 5
  • Heat Shock 60kDa Protein 1 (Chaperonin) Pseudogene 21 2 3
  • HSPD1-3P 3

External Ids for HSPD1P21 Gene

ORGUL Members for HSPD1P21 Gene

Previous GeneCards Identifiers for HSPD1P21 Gene

  • GC20U900566
  • GC20M040910
  • GC20M044170
  • GC20M044171
  • GC20M044174
  • GC20M044181

Summaries for HSPD1P21 Gene

GeneCards Summary for HSPD1P21 Gene

HSPD1P21 (Heat Shock Protein Family D (Hsp60) Member 1 Pseudogene 21) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HSPD1P21 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSPD1P21 Gene

Genomics for HSPD1P21 Gene

GeneHancer (GH) Regulatory Elements for HSPD1P21 Gene

Promoters and enhancers for HSPD1P21 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I045539 Promoter 0.5 EPDnew 550.8 +0.8 785 0.1 WFDC6 HSPD1P21 EPPIN-WFDC6
GH20I045538 Enhancer 0.4 ENCODE 550.8 +1.7 1729 0 ZNF143 FOS ENSG00000232135 HSPD1P21 WFDC6 EPPIN-WFDC6
GH20I045770 Enhancer 1.3 Ensembl ENCODE dbSUPER 10.3 -231.1 -231051 1.1 CLOCK FOXA2 MLX ARID4B SLC30A9 ARID2 ZNF143 DEK RXRA NCOA1 WFDC3 WFDC13 SPINT5P HNRNPA1P3 DNTTIP1 EPPIN EPPIN-WFDC6 ENSG00000232135 HSPD1P21 WFDC6
GH20I044702 Enhancer 1.2 Ensembl ENCODE dbSUPER 4.4 +835.5 835471 4.8 PKNOX1 YBX1 RARA ZNF366 FOS RUNX3 ZBTB11 USF2 ELF1 NR2F2 KCNK15 KCNK15-AS1 SDC4 ENSG00000132832 HSPD1P21 WISP2
GH20I045765 Enhancer 0.3 ENCODE 10.3 -226.1 -226117 2.6 POLR2A WFDC3 WFDC13 DNTTIP1 HNRNPA1P3 EPPIN EPPIN-WFDC6 ENSG00000232135 HSPD1P21 WFDC6 SPINT3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HSPD1P21 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HSPD1P21 Gene

Genomic Locations for HSPD1P21 Gene
chr20:45,539,975-45,540,286
(GRCh38/hg38)
Size:
312 bases
Orientation:
Minus strand
chr20:44,168,614-44,168,925
(GRCh37/hg19)

Genomic View for HSPD1P21 Gene

Genes around HSPD1P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSPD1P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSPD1P21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSPD1P21 Gene

Proteins for HSPD1P21 Gene

Post-translational modifications for HSPD1P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSPD1P21 Gene

Domains & Families for HSPD1P21 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSPD1P21 Gene

Function for HSPD1P21 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSPD1P21 Gene

Localization for HSPD1P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSPD1P21 Gene

Pathways & Interactions for HSPD1P21 Gene

SuperPathways for HSPD1P21 Gene

No Data Available

Interacting Proteins for HSPD1P21 Gene

Gene Ontology (GO) - Biological Process for HSPD1P21 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSPD1P21 Gene

Drugs & Compounds for HSPD1P21 Gene

No Compound Related Data Available

Transcripts for HSPD1P21 Gene

mRNA/cDNA for HSPD1P21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HSPD1P21 Gene

No ASD Table

Relevant External Links for HSPD1P21 Gene

GeneLoc Exon Structure for
HSPD1P21
ECgene alternative splicing isoforms for
HSPD1P21

Expression for HSPD1P21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HSPD1P21 Gene

mRNA differential expression in normal tissues according to GTEx for HSPD1P21 Gene

This gene is overexpressed in Testis (x40.8) and Cervix - Endocervix (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of HSPD1P21 Gene:

HSPD1P21
genes like me logo Genes that share expression patterns with HSPD1P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSPD1P21 Gene

Orthologs for HSPD1P21 Gene

Evolution for HSPD1P21 Gene

ENSEMBL:
Gene Tree for HSPD1P21 (if available)
TreeFam:
Gene Tree for HSPD1P21 (if available)

No data available for Orthologs for HSPD1P21 Gene

Paralogs for HSPD1P21 Gene

No data available for Paralogs for HSPD1P21 Gene

Variants for HSPD1P21 Gene

Additional Variant Information for HSPD1P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSPD1P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSPD1P21 Gene

Disorders for HSPD1P21 Gene

No disorders were found for HSPD1P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSPD1P21 Gene

Publications for HSPD1P21 Gene

  1. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K … Brocchieri L (BMC evolutionary biology 2010) 3 58
  2. Finishing the euchromatic sequence of the human genome. (PMID: 15496913) International Human Genome Sequencing Consortium (Nature 2004) 3 58
  3. Initial sequencing and analysis of the human genome. (PMID: 11237011) Lander ES … International Human Genome Sequencing Consortium (Nature 2001) 3 58
  4. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P … Rogers J (Nature 2001) 3 58

Products for HSPD1P21 Gene

Sources for HSPD1P21 Gene

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