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Aliases for HSPB1P1 Gene

Subcategory (RNA class) for HSPB1P1 Gene

lncRNA

Aliases for HSPB1P1 Gene

  • Heat Shock Protein Family B (Small) Member 1 Pseudogene 1 2 3 5
  • Heat Shock 27kDa Protein-Like 2 Pseudogene 2 3
  • Heat Shock 27kDa Protein 1 Pseudogene 1 2 3
  • Heat Shock 27kD Protein-Like 2 2 3
  • Heat Shock 27kDa Protein-Like 2 2
  • HSPBL2 3

External Ids for HSPB1P1 Gene

ORGUL Members for HSPB1P1 Gene

Previous HGNC Symbols for HSPB1P1 Gene

  • HSPBL2

Previous GeneCards Identifiers for HSPB1P1 Gene

  • GC09M074624

Summaries for HSPB1P1 Gene

GeneCards Summary for HSPB1P1 Gene

HSPB1P1 (Heat Shock Protein Family B (Small) Member 1 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HSPB1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSPB1P1 Gene

Genomics for HSPB1P1 Gene

GeneHancer (GH) Regulatory Elements for HSPB1P1 Gene

Promoters and enhancers for HSPB1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I072007 Promoter 0.5 Ensembl 550.8 +0.1 135 0.4 HSPB1P1 GC09M071961
GH09I071676 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 5.2 +328.2 328209 6.4 PKNOX1 FOXA2 ZFP64 ARID4B SIN3A DMAP1 ETS1 YY1 ATF7 PAF1 GC09P071678 HSPB1P1 TMEM2 LOC100420790
GH09I072024 Enhancer 0.9 Ensembl ENCODE 0.4 -17.6 -17607 1.6 NCOA3 CTCF USF1 MAX EBF1 RAD21 GATA3 ZNF143 SMC3 ZNF444 TMEM2 LOC101927108 HSPB1P1
GH09I072012 Enhancer 0.7 ENCODE 0.4 -5.1 -5133 2.1 SOX5 SOX13 FOXA2 SAP130 TEAD1 MLX FOXA3 ARID4B USF2 MNT TMEM2 HSPB1P1 LOC101927108
GH09I071983 Enhancer 0.8 Ensembl ENCODE 0.3 +23.1 23055 2.3 CTCF STAT1 USF1 ZFP64 USF2 RAD21 TEAD3 SP1 POLR2A POU5F1 GC09M071961 HSPB1P1 C9orf85
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HSPB1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HSPB1P1 Gene

Genomic Locations for HSPB1P1 Gene
chr9:72,007,759-72,008,136
(GRCh38/hg38)
Size:
378 bases
Orientation:
Minus strand
chr9:74,622,675-74,623,052
(GRCh37/hg19)

Genomic View for HSPB1P1 Gene

Genes around HSPB1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSPB1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSPB1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSPB1P1 Gene

Proteins for HSPB1P1 Gene

Post-translational modifications for HSPB1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSPB1P1 Gene

Domains & Families for HSPB1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSPB1P1 Gene

Function for HSPB1P1 Gene

Phenotypes From GWAS Catalog for HSPB1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSPB1P1 Gene

Localization for HSPB1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSPB1P1 Gene

Pathways & Interactions for HSPB1P1 Gene

SuperPathways for HSPB1P1 Gene

No Data Available

Interacting Proteins for HSPB1P1 Gene

Gene Ontology (GO) - Biological Process for HSPB1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSPB1P1 Gene

Drugs & Compounds for HSPB1P1 Gene

No Compound Related Data Available

Transcripts for HSPB1P1 Gene

mRNA/cDNA for HSPB1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HSPB1P1 Gene

No ASD Table

Relevant External Links for HSPB1P1 Gene

GeneLoc Exon Structure for
HSPB1P1
ECgene alternative splicing isoforms for
HSPB1P1

Expression for HSPB1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HSPB1P1 Gene

mRNA differential expression in normal tissues according to GTEx for HSPB1P1 Gene

This gene is overexpressed in Heart - Left Ventricle (x11.9) and Muscle - Skeletal (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of HSPB1P1 Gene:

HSPB1P1
genes like me logo Genes that share expression patterns with HSPB1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSPB1P1 Gene

Orthologs for HSPB1P1 Gene

Evolution for HSPB1P1 Gene

ENSEMBL:
Gene Tree for HSPB1P1 (if available)
TreeFam:
Gene Tree for HSPB1P1 (if available)

No data available for Orthologs for HSPB1P1 Gene

Paralogs for HSPB1P1 Gene

No data available for Paralogs for HSPB1P1 Gene

Variants for HSPB1P1 Gene

Additional Variant Information for HSPB1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSPB1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSPB1P1 Gene

Disorders for HSPB1P1 Gene

No disorders were found for HSPB1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSPB1P1 Gene

Publications for HSPB1P1 Gene

  1. Heat shock protein 27 gene: chromosomal and molecular location and relationship to Williams syndrome. (PMID: 12838549) Stock AD … Hobart HH (American journal of medical genetics. Part A 2003) 2 3 58
  2. Chromosomal assignments of human 27-kDa heat shock protein gene family. (PMID: 2538929) McGuire SE … McGuire WL (Somatic cell and molecular genetics 1989) 2 3 58

Products for HSPB1P1 Gene

Sources for HSPB1P1 Gene

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