Aliases for HSD17B7P2 Gene

Aliases for HSD17B7P2 Gene

  • Hydroxysteroid 17-Beta Dehydrogenase 7 Pseudogene 2 2 3 5
  • Hydroxysteroid (17-Beta) Dehydrogenase 7 Pseudogene 2 2
  • 17beta-Hydroxysteroid Dehydrogenase Type 7 Form 2 3
  • BA291L22.1 3
  • Hsd17b_2 3
  • HSD17B7 3

External Ids for HSD17B7P2 Gene

Previous GeneCards Identifiers for HSD17B7P2 Gene

  • GC10U900126
  • GC10P038686

Summaries for HSD17B7P2 Gene

GeneCards Summary for HSD17B7P2 Gene

HSD17B7P2 (Hydroxysteroid 17-Beta Dehydrogenase 7 Pseudogene 2) is a Pseudogene.

Additional gene information for HSD17B7P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSD17B7P2 Gene

Genomics for HSD17B7P2 Gene

GeneHancer (GH) Regulatory Elements for HSD17B7P2 Gene

Promoters and enhancers for HSD17B7P2 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSD17B7P2 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the HSD17B7P2 gene promoter:
  • AhR
  • AREB6
  • Arnt
  • COMP1
  • CUTL1
  • ER-alpha
  • GATA-3
  • HOXA3
  • LCR-F1
  • Sp1

Genomic Locations for HSD17B7P2 Gene

Genomic Locations for HSD17B7P2 Gene
chr10:38,356,380-38,378,505
(GRCh38/hg38)
Size:
22,126 bases
Orientation:
Plus strand
chr10:38,645,305-38,667,433
(GRCh37/hg19)
Size:
22,129 bases
Orientation:
Plus strand

Genomic View for HSD17B7P2 Gene

Genes around HSD17B7P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSD17B7P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSD17B7P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSD17B7P2 Gene

Proteins for HSD17B7P2 Gene

Post-translational modifications for HSD17B7P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSD17B7P2 Gene

Domains & Families for HSD17B7P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSD17B7P2 Gene

Function for HSD17B7P2 Gene

Phenotypes From GWAS Catalog for HSD17B7P2 Gene

Phenotypes for HSD17B7P2 Gene

genes like me logo Genes that share phenotypes with HSD17B7P2: view

miRNA for HSD17B7P2 Gene

miRTarBase miRNAs that target HSD17B7P2

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for HSD17B7P2 Gene

Localization for HSD17B7P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSD17B7P2 Gene

Pathways & Interactions for HSD17B7P2 Gene

PathCards logo

SuperPathways for HSD17B7P2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for HSD17B7P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSD17B7P2 Gene

Drugs & Compounds for HSD17B7P2 Gene

(2) Drugs for HSD17B7P2 Gene - From: Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials

(3) Additional Compounds for HSD17B7P2 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with HSD17B7P2: view

Transcripts for HSD17B7P2 Gene

mRNA/cDNA for HSD17B7P2 Gene

2 REFSEQ mRNAs :
8 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HSD17B7P2 Gene

No ASD Table

Relevant External Links for HSD17B7P2 Gene

GeneLoc Exon Structure for
HSD17B7P2

Expression for HSD17B7P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HSD17B7P2 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for HSD17B7P2

SOURCE GeneReport for Unigene cluster for HSD17B7P2 Gene:

Hs.652484
genes like me logo Genes that share expression patterns with HSD17B7P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSD17B7P2 Gene

Orthologs for HSD17B7P2 Gene

Evolution for HSD17B7P2 Gene

ENSEMBL:
Gene Tree for HSD17B7P2 (if available)
TreeFam:
Gene Tree for HSD17B7P2 (if available)

No data available for Orthologs for HSD17B7P2 Gene

Paralogs for HSD17B7P2 Gene

No data available for Paralogs for HSD17B7P2 Gene

Variants for HSD17B7P2 Gene

Structural Variations from Database of Genomic Variants (DGV) for HSD17B7P2 Gene

Variant ID Type Subtype PubMed ID
dgv10e203 CNV gain 21179565
dgv709n100 CNV gain 25217958
esv33710 CNV loss 17666407
esv3576438 CNV gain 25503493
nsv428230 CNV loss 18775914
nsv947859 CNV duplication 23825009

Additional Variant Information for HSD17B7P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSD17B7P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for HSD17B7P2 Gene

Disorders for HSD17B7P2 Gene

Additional Disease Information for HSD17B7P2

No disorders were found for HSD17B7P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HSD17B7P2 Gene

Publications for HSD17B7P2 Gene

  1. Determination of cDNA, gene structure and chromosomal localization of the novel human 17beta-hydroxysteroid dehydrogenase type 7(1). (PMID: 10544267) Krazeisen A … Adamski J (FEBS letters 1999) 2 3 23 54
  2. Closing the gap: identification of human 3-ketosteroid reductase, the last unknown enzyme of mammalian cholesterol biosynthesis. (PMID: 12829805) Marijanovic Z … Breitling R (Molecular endocrinology (Baltimore, Md.) 2003) 3 23 54
  3. Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing. (PMID: 28611215) Fei T … Brown M (Proceedings of the National Academy of Sciences of the United States of America 2017) 3 54
  4. Analysis of 17beta-hydroxysteroid dehydrogenase types 5, 7, and 12 genetic sequence variants in breast cancer cases from French Canadian Families with high risk of breast and ovarian cancer. (PMID: 19460435) Plourde M … Simard J (The Journal of steroid biochemistry and molecular biology 2009) 23 54
  5. Single nucleotide polymorphisms of 17beta-hydroxysteroid dehydrogenase type 7 gene: mechanism of estramustine-related adverse reactions? (PMID: 19735314) Ozeki T … Yamada Y (International journal of urology : official journal of the Japanese Urological Association 2009) 23 54

Products for HSD17B7P2 Gene

Sources for HSD17B7P2 Gene