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Aliases for HSD17B7P2 Gene

Aliases for HSD17B7P2 Gene

  • Hydroxysteroid 17-Beta Dehydrogenase 7 Pseudogene 2 2 3 5
  • Hydroxysteroid (17-Beta) Dehydrogenase 7 Pseudogene 2 2
  • 17beta-Hydroxysteroid Dehydrogenase Type 7 Form 2 3
  • BA291L22.1 3
  • Hsd17b_2 3
  • HSD17B7 3

External Ids for HSD17B7P2 Gene

Previous GeneCards Identifiers for HSD17B7P2 Gene

  • GC10U900126
  • GC10P038686

Summaries for HSD17B7P2 Gene

GeneCards Summary for HSD17B7P2 Gene

HSD17B7P2 (Hydroxysteroid 17-Beta Dehydrogenase 7 Pseudogene 2) is a Pseudogene.

Additional gene information for HSD17B7P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSD17B7P2 Gene

Genomics for HSD17B7P2 Gene

GeneHancer (GH) Regulatory Elements for HSD17B7P2 Gene

Promoters and enhancers for HSD17B7P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I038354 Promoter/Enhancer 1.3 Ensembl ENCODE 567.6 -0.4 -441 3.3 HDGF PKNOX1 ARID4B SIN3A GLI4 ZNF335 ATF7 CREM THAP11 SP3 HSD17B7P2 ENSG00000272983 LOC100420618 ENSG00000283930
GH10I038401 Promoter/Enhancer 1.5 Ensembl ENCODE 19.6 +46.6 46561 2.8 PKNOX1 ATF1 SMAD1 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF766 SEPT7P9 LOC101929540 ENSG00000276805 HSD17B7P2 ENSG00000272983 LINC00999 SLC9B1P3 ENSG00000226447
GH10I038093 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 11.2 -261.7 -261723 2.1 FOXA2 ATF1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ETS1 ZNF766 ZNF37A ENSG00000283930 ENSG00000272983 CICP9 HSD17B7P2 ZNF25 SLC9B1P3 GC10P038118
GH10I037856 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 5.1 -498.9 -498860 2.7 CLOCK SMAD1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 IRF4 YY1 ENSG00000236514 ZNF248 ZNF25 ENSG00000226447 HSD17B7P2 TLK2P2
GH10I038009 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 3.7 -345.4 -345431 3 HDGF MLX ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 POLR2B ZNF213 ZNF33A ZNF25 ENSG00000226447 SEPT7P9 HSD17B7P2 RNU6-795P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HSD17B7P2 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the HSD17B7P2 gene promoter:

Genomic Locations for HSD17B7P2 Gene

Genomic Locations for HSD17B7P2 Gene
chr10:38,356,380-38,378,505
(GRCh38/hg38)
Size:
22,126 bases
Orientation:
Plus strand
chr10:38,645,305-38,667,433
(GRCh37/hg19)

Genomic View for HSD17B7P2 Gene

Genes around HSD17B7P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSD17B7P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSD17B7P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSD17B7P2 Gene

Proteins for HSD17B7P2 Gene

Post-translational modifications for HSD17B7P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSD17B7P2 Gene

Domains & Families for HSD17B7P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSD17B7P2 Gene

Function for HSD17B7P2 Gene

Phenotypes From GWAS Catalog for HSD17B7P2 Gene

Phenotypes for HSD17B7P2 Gene

GenomeRNAi human phenotypes for HSD17B7P2:
genes like me logo Genes that share phenotypes with HSD17B7P2: view

Animal Model Products

miRNA for HSD17B7P2 Gene

miRTarBase miRNAs that target HSD17B7P2

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for HSD17B7P2 Gene

Localization for HSD17B7P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSD17B7P2 Gene

Pathways & Interactions for HSD17B7P2 Gene

SuperPathways for HSD17B7P2 Gene

No Data Available

Interacting Proteins for HSD17B7P2 Gene

Gene Ontology (GO) - Biological Process for HSD17B7P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSD17B7P2 Gene

Drugs & Compounds for HSD17B7P2 Gene

(2) Drugs for HSD17B7P2 Gene - From: Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials

(3) Additional Compounds for HSD17B7P2 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with HSD17B7P2: view

Transcripts for HSD17B7P2 Gene

mRNA/cDNA for HSD17B7P2 Gene

Unigene Clusters for HSD17B7P2 Gene

Hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2:
Representative Sequences:

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for HSD17B7P2 Gene

No ASD Table

Relevant External Links for HSD17B7P2 Gene

GeneLoc Exon Structure for
HSD17B7P2
ECgene alternative splicing isoforms for
HSD17B7P2

Expression for HSD17B7P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HSD17B7P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of HSD17B7P2 Gene:

HSD17B7P2

SOURCE GeneReport for Unigene cluster for HSD17B7P2 Gene:

Hs.652484
genes like me logo Genes that share expression patterns with HSD17B7P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSD17B7P2 Gene

Orthologs for HSD17B7P2 Gene

Evolution for HSD17B7P2 Gene

ENSEMBL:
Gene Tree for HSD17B7P2 (if available)
TreeFam:
Gene Tree for HSD17B7P2 (if available)

No data available for Orthologs for HSD17B7P2 Gene

Paralogs for HSD17B7P2 Gene

No data available for Paralogs for HSD17B7P2 Gene

Variants for HSD17B7P2 Gene

Sequence variations from dbSNP and Humsavar for HSD17B7P2 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000163511 -- 38,377,554(+) C/T intron_variant
rs1000605469 -- 38,358,735(+) C/T intron_variant
rs1000809119 -- 38,376,634(+) G/A intron_variant
rs1000914729 -- 38,358,478(+) C/T non_coding_transcript_variant
rs1001061571 -- 38,371,358(+) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for HSD17B7P2 Gene

Variant ID Type Subtype PubMed ID
nsv947859 CNV duplication 23825009
nsv428230 CNV loss 18775914
esv3576438 CNV gain 25503493
esv33710 CNV loss 17666407
dgv709n100 CNV gain 25217958
dgv10e203 CNV gain 21179565

Additional Variant Information for HSD17B7P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSD17B7P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HSD17B7P2 Gene

Disorders for HSD17B7P2 Gene

Additional Disease Information for HSD17B7P2

No disorders were found for HSD17B7P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HSD17B7P2 Gene

Publications for HSD17B7P2 Gene

  1. Determination of cDNA, gene structure and chromosomal localization of the novel human 17beta-hydroxysteroid dehydrogenase type 7(1). (PMID: 10544267) Krazeisen A … Adamski J (FEBS letters 1999) 2 3 22 58
  2. Closing the gap: identification of human 3-ketosteroid reductase, the last unknown enzyme of mammalian cholesterol biosynthesis. (PMID: 12829805) Marijanovic Z … Breitling R (Molecular endocrinology (Baltimore, Md.) 2003) 3 22 58
  3. Analysis of 17beta-hydroxysteroid dehydrogenase types 5, 7, and 12 genetic sequence variants in breast cancer cases from French Canadian Families with high risk of breast and ovarian cancer. (PMID: 19460435) Plourde M … Simard J (The Journal of steroid biochemistry and molecular biology 2009) 22 58
  4. Single nucleotide polymorphisms of 17beta-hydroxysteroid dehydrogenase type 7 gene: mechanism of estramustine-related adverse reactions? (PMID: 19735314) Ozeki T … Yamada Y (International journal of urology : official journal of the Japanese Urological Association 2009) 22 58
  5. Depot-specific steroidogenic gene transcription in human adipose tissue. (PMID: 18410552) MacKenzie SM … Davies E (Clinical endocrinology 2008) 22 58

Products for HSD17B7P2 Gene

Sources for HSD17B7P2 Gene

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