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Aliases for HSD11B1L Gene

Aliases for HSD11B1L Gene

  • Hydroxysteroid 11-Beta Dehydrogenase 1 Like 2 3 5
  • Short Chain Dehydrogenase/Reductase Family 26C Member 2 3 4
  • Hydroxysteroid 11-Beta-Dehydrogenase 1-Like Protein 3 4
  • 11-Beta-Hydroxysteroid Dehydrogenase Type 3 3 4
  • Short Chain Dehydrogenase/Reductase 10 2 3
  • 11-Beta-HSD3 3 4
  • SDR26C2 3 4
  • 11-DH3 3 4
  • SCDR10 3 4
  • HSD3 3 4
  • Short Chain Dehydrogenase/Reductase Family 26C, Member 2 2
  • Hydroxysteroid (11-Beta) Dehydrogenase 1-Like 2
  • Short-Chain Dehydrogenase/Reductase 10 4
  • EC 1.1.1.- 4
  • EC 1.1.1 56
  • SCDR10B 3
  • HSD1L 3

External Ids for HSD11B1L Gene

Previous GeneCards Identifiers for HSD11B1L Gene

  • GC19P005633
  • GC19P005441

Summaries for HSD11B1L Gene

Entrez Gene Summary for HSD11B1L Gene

  • This gene is a member of the hydroxysteroid dehydrogenase family. The encoded protein is similar to an enzyme that catalyzes the interconversion of inactive to active glucocorticoids (e.g. cortisone). Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jun 2012]

GeneCards Summary for HSD11B1L Gene

HSD11B1L (Hydroxysteroid 11-Beta Dehydrogenase 1 Like) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include oxidoreductase activity. An important paralog of this gene is HSD11B1.

Additional gene information for HSD11B1L Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSD11B1L Gene

Genomics for HSD11B1L Gene

GeneHancer (GH) Regulatory Elements for HSD11B1L Gene

Promoters and enhancers for HSD11B1L Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J005679 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 610.3 +0.1 93 3 ZNF473 SP1 ZFX ELF3 SIX5 CBFA2T2 NKRF MLLT1 RERE POLR2A HSD11B1L MICOS13 DUS3L SAFB KHSRP ENSG00000267571 KDM4B RANBP3 SAFB2 GTF2F1
GH19J005685 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 600.4 +6.5 6465 2.3 SP1 CTCF ELF3 MNT NKRF CEBPG ZBTB7A SP7 TRIM24 SP5 HSD11B1L PTPRS DUS3L LONP1 ENSG00000267571 VMAC SNRPEP4 KHSRP SAFB KDM4B
GH19J005620 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.8 -57.2 -57216 6 ZFX ELF3 MNT NKRF POLR2A MLLT1 ZNF121 GTF2F1 ZSCAN21 MAFK SAFB2 SAFB RPL36 KHSRP HSD11B1L MICOS13 GTF2F1 RANBP3 PTPRS LONP1
GH19J006527 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 9.7 +850.3 850281 6.6 ZNF473 SP1 ELF3 CC2D1A ZFX ZNF148 NKRF POLR2A MLLT1 GTF2F1 TNFSF9 ZNF557 KHSRP DUS3L SAFB SAFB2 SNRPEP4 RANBP3 GTF2F1 ENSG00000267571
GH19J004770 Promoter/Enhancer 1.6 Ensembl ENCODE 9.7 -910.9 -910904 1.4 SP1 ZNF652 CC2D1A ELF3 ZKSCAN8 MNT ZNF148 NKRF ZNF121 CEBPG MIR7-3HG MIR7-3 GC19P004787 GC19P004774 ENSG00000267030 ENSG00000267769 SAFB YJU2 PTPRS DPP9-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSD11B1L on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the HSD11B1L gene promoter:
  • p300
  • USF-1
  • USF1

Genomic Locations for HSD11B1L Gene

Genomic Locations for HSD11B1L Gene
chr19:5,680,604-5,688,523
(GRCh38/hg38)
Size:
7,920 bases
Orientation:
Plus strand
chr19:5,680,615-5,688,533
(GRCh37/hg19)
Size:
7,919 bases
Orientation:
Plus strand

Genomic View for HSD11B1L Gene

Genes around HSD11B1L on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSD11B1L Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSD11B1L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSD11B1L Gene

Proteins for HSD11B1L Gene

  • Protein details for HSD11B1L Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7Z5J1-DHI1L_HUMAN
    Recommended name:
    Hydroxysteroid 11-beta-dehydrogenase 1-like protein
    Protein Accession:
    Q7Z5J1
    Secondary Accessions:
    • Q05D45
    • Q52LF4
    • Q7Z5I9
    • Q7Z5J0
    • Q7Z5P5
    • Q7Z5P6
    • Q7Z5P7
    • Q7Z5P8

    Protein attributes for HSD11B1L Gene

    Size:
    315 amino acids
    Molecular mass:
    34288 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for HSD11B1L Gene

neXtProt entry for HSD11B1L Gene

Selected DME Specific Peptides for HSD11B1L Gene

Q7Z5J1:
  • GARVLLTG
  • LAYHYARLG

Post-translational modifications for HSD11B1L Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Domains & Families for HSD11B1L Gene

Gene Families for HSD11B1L Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins
  • Predicted membrane proteins
  • Predicted secreted proteins

Protein Domains for HSD11B1L Gene

Suggested Antigen Peptide Sequences for HSD11B1L Gene

GenScript: Design optimal peptide antigens:
  • Short-chain dehydrogenase/reductase 10 (DHI1L_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q7Z5J1

UniProtKB/Swiss-Prot:

DHI1L_HUMAN :
  • Belongs to the short-chain dehydrogenases/reductases (SDR) family.
Family:
  • Belongs to the short-chain dehydrogenases/reductases (SDR) family.
genes like me logo Genes that share domains with HSD11B1L: view

Function for HSD11B1L Gene

Enzyme Numbers (IUBMB) for HSD11B1L Gene

Phenotypes From GWAS Catalog for HSD11B1L Gene

Gene Ontology (GO) - Molecular Function for HSD11B1L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016491 oxidoreductase activity IEA --
genes like me logo Genes that share ontologies with HSD11B1L: view
genes like me logo Genes that share phenotypes with HSD11B1L: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials (abm): Clones for HSD11B1L - Now 50% OFF >
  • * HSD11B1L as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
  • * HSD11B1L tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All

No data available for Molecular function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for HSD11B1L Gene

Localization for HSD11B1L Gene

Subcellular locations from UniProtKB/Swiss-Prot for HSD11B1L Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for HSD11B1L gene
Compartment Confidence
extracellular 4
nucleus 4
mitochondrion 1
endoplasmic reticulum 1
cytosol 0

Subcellular locations from the

Human Protein Atlas (HPA)

Gene Ontology (GO) - Cellular Components for HSD11B1L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
GO:0005654 nucleoplasm IDA --
GO:0043231 intracellular membrane-bounded organelle IDA --
genes like me logo Genes that share ontologies with HSD11B1L: view

Pathways & Interactions for HSD11B1L Gene

PathCards logo

SuperPathways for HSD11B1L Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSD11B1L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0055114 oxidation-reduction process IEA --
genes like me logo Genes that share ontologies with HSD11B1L: view

No data available for Pathways by source and SIGNOR curated interactions for HSD11B1L Gene

Drugs & Compounds for HSD11B1L Gene

No Compound Related Data Available

Transcripts for HSD11B1L Gene

Unigene Clusters for HSD11B1L Gene

Hydroxysteroid (11-beta) dehydrogenase 1-like:
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials (abm): Clones for HSD11B1L - Now 50% OFF >
  • * HSD11B1L as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
  • * HSD11B1L tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All

Alternative Splicing Database (ASD) splice patterns (SP) for HSD11B1L Gene

ExUns: 1a · 1b · 1c · 1d · 1e · 1f · 1g ^ 2 ^ 3a · 3b · 3c ^ 4a · 4b · 4c ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9a · 9b · 9c ^ 10 ^ 11a · 11b · 11c
SP1: - - - - -
SP2: - - - -
SP3: - - - - -
SP4: - - - - -
SP5: - - - - - -
SP6: - - - - - -
SP7: - - - - - - -
SP8: - - - - - - - -
SP9: - - - - - - -
SP10: - - - - -
SP11: - - - -
SP12: - - -
SP13: - - - - - - - -
SP14: - - -
SP15: -
SP16: - - - - - - - - -
SP17: - - -
SP18: - - - - -
SP19:

Relevant External Links for HSD11B1L Gene

GeneLoc Exon Structure for
HSD11B1L
ECgene alternative splicing isoforms for
HSD11B1L

Expression for HSD11B1L Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HSD11B1L Gene

mRNA differential expression in normal tissues according to GTEx for HSD11B1L Gene

This gene is overexpressed in Brain - Amygdala (x5.1), Brain - Cortex (x4.9), Brain - Anterior cingulate cortex (BA24) (x4.6), Brain - Frontal Cortex (BA9) (x4.2), and Brain - Hippocampus (x4.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for HSD11B1L Gene



NURSA nuclear receptor signaling pathways regulating expression of HSD11B1L Gene:

HSD11B1L

SOURCE GeneReport for Unigene cluster for HSD11B1L Gene:

Hs.631840

Evidence on tissue expression from TISSUES for HSD11B1L Gene

  • Nervous system(4.9)
genes like me logo Genes that share expression patterns with HSD11B1L: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSD11B1L Gene

Orthologs for HSD11B1L Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for HSD11B1L Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia HSD11B1L 35 34
  • 93.31 (n)
OneToOne
dog
(Canis familiaris)
Mammalia HSD11B1L 34 35
  • 90.31 (n)
cow
(Bos Taurus)
Mammalia HSD11B1L 34 35
  • 85.55 (n)
chicken
(Gallus gallus)
Aves HSD11B1L 35 34
  • 64.3 (n)
OneToOne
lizard
(Anolis carolinensis)
Reptilia HSD11B1L 35
  • 56 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia hsd11b1l 34
  • 52.72 (n)
zebrafish
(Danio rerio)
Actinopterygii hsd11b1la 35 34
  • 55.82 (n)
OneToMany
HSD11B1L (1 of 2) 35
  • 40 (a)
OneToMany
-- 34
thale cress
(Arabidopsis thaliana)
eudicotyledons HSD1 34
  • 45.32 (n)
rice
(Oryza sativa)
Liliopsida Os12g0464400 34
  • 47.46 (n)
Species where no ortholog for HSD11B1L was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for HSD11B1L Gene

ENSEMBL:
Gene Tree for HSD11B1L (if available)
TreeFam:
Gene Tree for HSD11B1L (if available)
Aminode:
Evolutionary constrained regions (ECRs) for HSD11B1L: view image

Paralogs for HSD11B1L Gene

(1) SIMAP similar genes for HSD11B1L Gene using alignment to 7 proteins:

  • DHI1L_HUMAN
  • J3KRL3_HUMAN
  • J3KTC8_HUMAN
  • J3QKQ3_HUMAN
  • J3QKX1_HUMAN
  • J3QS77_HUMAN
  • J3QSE6_HUMAN
genes like me logo Genes that share paralogs with HSD11B1L: view

Variants for HSD11B1L Gene

Sequence variations from dbSNP and Humsavar for HSD11B1L Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000284436 -- 5,682,605(+) G/A intron_variant
rs1000335820 -- 5,687,964(+) C/A 3_prime_UTR_variant, coding_sequence_variant, missense_variant, synonymous_variant
rs1000668176 -- 5,686,698(+) C/A intron_variant
rs1000919098 -- 5,682,248(+) A/G intron_variant
rs1001067229 -- 5,687,819(+) C/T coding_sequence_variant, intron_variant, missense_variant, synonymous_variant

Structural Variations from Database of Genomic Variants (DGV) for HSD11B1L Gene

Variant ID Type Subtype PubMed ID
nsv1062851 CNV gain 25217958
nsv953952 CNV deletion 24416366

Variation tolerance for HSD11B1L Gene

Gene Damage Index Score: 1.82; 34.24% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for HSD11B1L Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSD11B1L

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HSD11B1L Gene

Disorders for HSD11B1L Gene

Additional Disease Information for HSD11B1L

No disorders were found for HSD11B1L Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HSD11B1L Gene

Publications for HSD11B1L Gene

  1. Hydroxysteroid dehydrogenase HSD1L is localised to the pituitary-gonadal axis of primates. (PMID: 28871060) Bird AD … Cole TJ (Endocrine connections 2017) 2 3 58
  2. Evolution of 11beta-hydroxysteroid dehydrogenase-type 1 and 11beta-hydroxysteroid dehydrogenase-type 3. (PMID: 20350543) Baker ME (FEBS letters 2010) 3 58
  3. Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics. (PMID: 21145461) Bennett EJ … Harper JW (Cell 2010) 3 58
  4. Isolation and characterization of novel human short-chain dehydrogenase/reductase SCDR10B which is highly expressed in the brain and acts as hydroxysteroid dehydrogenase. (PMID: 19436836) Huang C … Yu L (Acta biochimica Polonica 2009) 3 58
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for HSD11B1L Gene

Sources for HSD11B1L Gene

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