Aliases for HSD11B1-AS1 Gene

Subcategory (RNA class) for HSD11B1-AS1 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for HSD11B1-AS1 Gene

  • HSD11B1 Antisense RNA 1 2 3 5
  • HSALNG0010218 169
  • NONHSAG004165 94
  • Lnc-LAMB3-1 170

External Ids for HSD11B1-AS1 Gene

Summaries for HSD11B1-AS1 Gene

GeneCards Summary for HSD11B1-AS1 Gene

HSD11B1-AS1 (HSD11B1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with HSD11B1-AS1 include Cortisone Reductase Deficiency 2 and Cortisone Reductase Deficiency.

Additional gene information for HSD11B1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSD11B1-AS1 Gene

Genomics for HSD11B1-AS1 Gene

GeneHancer (GH) Regulatory Elements for HSD11B1-AS1 Gene

Promoters and enhancers for HSD11B1-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSD11B1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HSD11B1-AS1 Gene

Genomic Locations for HSD11B1-AS1 Gene
chr1:209,661,225-209,757,599
(GRCh38/hg38)
Size:
96,375 bases
Orientation:
Minus strand
chr1:209,834,709-209,897,470
(GRCh37/hg19)
Size:
62,762 bases
Orientation:
Minus strand

Genomic View for HSD11B1-AS1 Gene

Genes around HSD11B1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSD11B1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSD11B1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSD11B1-AS1 Gene

Proteins for HSD11B1-AS1 Gene

Post-translational modifications for HSD11B1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSD11B1-AS1 Gene

Domains & Families for HSD11B1-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSD11B1-AS1 Gene

Function for HSD11B1-AS1 Gene

Phenotypes From GWAS Catalog for HSD11B1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSD11B1-AS1 Gene

Localization for HSD11B1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSD11B1-AS1 Gene

Pathways & Interactions for HSD11B1-AS1 Gene

PathCards logo

SuperPathways for HSD11B1-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSD11B1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSD11B1-AS1 Gene

Drugs & Compounds for HSD11B1-AS1 Gene

No Compound Related Data Available

Transcripts for HSD11B1-AS1 Gene

mRNA/cDNA for HSD11B1-AS1 Gene

(3) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(12) RNACentral transcripts :
(12) LNCipedia transcripts :
(3) NONCODE transcripts :
(5) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for HSD11B1-AS1 Gene

No ASD Table

Relevant External Links for HSD11B1-AS1 Gene

GeneLoc Exon Structure for
HSD11B1-AS1
ECgene alternative splicing isoforms for
HSD11B1-AS1

Expression for HSD11B1-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSD11B1-AS1 Gene

Orthologs for HSD11B1-AS1 Gene

Evolution for HSD11B1-AS1 Gene

ENSEMBL:
Gene Tree for HSD11B1-AS1 (if available)
TreeFam:
Gene Tree for HSD11B1-AS1 (if available)

No data available for Orthologs for HSD11B1-AS1 Gene

Paralogs for HSD11B1-AS1 Gene

No data available for Paralogs for HSD11B1-AS1 Gene

Variants for HSD11B1-AS1 Gene

Sequence variations from dbSNP and Humsavar for HSD11B1-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs12086634 uncertain-significance, Cortisone reductase deficiency 2 209,706,914(-) T/G genic_upstream_transcript_variant, intron_variant
rs387907168 pathogenic, Cortisone reductase deficiency 2 209,707,020(-) C/T genic_upstream_transcript_variant, intron_variant
rs45487298 uncertain-significance, Cortisone reductase deficiency 2 209,706,872(-) AA/AAA genic_upstream_transcript_variant, intron_variant
rs41283132 likely-benign, not specified 209,734,386(-) G/A/C genic_upstream_transcript_variant, intron_variant
rs1000051536 -- 209,677,913(-) T/C genic_upstream_transcript_variant, intron_variant

Additional Variant Information for HSD11B1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSD11B1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSD11B1-AS1 Gene

Disorders for HSD11B1-AS1 Gene

MalaCards: The human disease database

(2) MalaCards diseases for HSD11B1-AS1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
cortisone reductase deficiency 2
  • cortrd2
cortisone reductase deficiency
  • cortrd
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with HSD11B1-AS1: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for HSD11B1-AS1 Gene

Publications for HSD11B1-AS1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 56

No data available for External Links for HSD11B1-AS1 Gene

Products for HSD11B1-AS1 Gene

Sources for HSD11B1-AS1 Gene