Aliases for HSALNG0135516 Gene

Subcategory (RNA class) for HSALNG0135516 Gene

lncRNA

Number of RNA Genes sources:

1 / 14

Aliases for HSALNG0135516 Gene

  • HSALNG0135516 167

Previous GeneCards Identifiers for HSALNG0135516 Gene

  • GC22M043024

No data available for External Ids for HSALNG0135516 Gene

Summaries for HSALNG0135516 Gene

GeneCards Summary for HSALNG0135516 Gene

HSALNG0135516 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0135516 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0135516 Gene

Genomics for HSALNG0135516 Gene

GeneHancer (GH) Regulatory Elements for HSALNG0135516 Gene

Promoters and enhancers for HSALNG0135516 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J039559 Enhancer 0.8 Ensembl ENCODE 500.7 -1.8 -1787 1 CTCF TEAD4 REST SMC3 PCBP1 BCL11A RXRA ZNF263 ESR1 YY1 CACNA1I HSALNG0135516 MGAT3 piR-31534-459
GH22J039557 Promoter 0.7 EPDnew 500.7 +0.0 28 0.1 SMC3 POLR2G EZH2 ZBTB7A VEZF1 CTCF RBFOX2 RAD21 CACNA1I HSALNG0135516 MGAT3 piR-35811
GH22J039530 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +24.8 24768 4.6 FOXK2 ZBTB40 EP300 CTCF SIN3A TCF12 NRF1 MYC POLR2G USF1 RPS19BP1 lnc-RPL3-2 piR-35811 ATF4 RPL3 TNRC6B CACNA1I FAM83F MGAT3 ENSG00000228274
GH22J039545 Enhancer 1.1 Ensembl ENCODE 0.4 +11.9 11852 0.8 TEAD4 REST GABPA AFF1 ZBTB25 TGIF2 TEAD1 ZBTB26 ZSCAN9 MIER1 MGAT3 ATF4 HSALNG0135516 piR-35811
GH22J039543 Enhancer 0.7 Ensembl 0.4 +14.4 14412 0.7 CTCF NRF1 USF1 GABPA REST RAD21 MYC SMC3 RBM25 MIER1 ATF4 HSALNG0135516 piR-35811
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0135516 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HSALNG0135516 Gene

Genomic Locations for HSALNG0135516 Gene
chr22:39,556,797-39,557,864
(GRCh38/hg38)
Size:
1,068 bases
Orientation:
Minus strand

Genomic View for HSALNG0135516 Gene

Genes around HSALNG0135516 on UCSC Golden Path with GeneCards custom track

HSALNG0135516 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0135516 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0135516 Gene

Proteins for HSALNG0135516 Gene

Post-translational modifications for HSALNG0135516 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0135516 Gene

Domains & Families for HSALNG0135516 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0135516 Gene

Function for HSALNG0135516 Gene

Phenotypes From GWAS Catalog for HSALNG0135516 Gene

miRNA for HSALNG0135516 Gene

miRTarBase miRNAs that target HSALNG0135516

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for HSALNG0135516 Gene

Localization for HSALNG0135516 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0135516 Gene

Pathways & Interactions for HSALNG0135516 Gene

PathCards logo

SuperPathways for HSALNG0135516 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for HSALNG0135516 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0135516 Gene

Drugs & Compounds for HSALNG0135516 Gene

No Compound Related Data Available

Transcripts for HSALNG0135516 Gene

mRNA/cDNA for HSALNG0135516 Gene

1 RNACentral transcripts :
1 LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0135516 Gene

No ASD Table

Relevant External Links for HSALNG0135516 Gene

GeneLoc Exon Structure for
HSALNG0135516

Expression for HSALNG0135516 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0135516 Gene

Orthologs for HSALNG0135516 Gene

No data available for Orthologs and Evolution for HSALNG0135516 Gene

Paralogs for HSALNG0135516 Gene

No data available for Paralogs for HSALNG0135516 Gene

Variants for HSALNG0135516 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0135516 Gene

Disorders for HSALNG0135516 Gene

No disorders were found for HSALNG0135516 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0135516 Gene

Publications for HSALNG0135516 Gene

No publications were found for HSALNG0135516 Gene.

No data available for Mastermind for HSALNG0135516 Gene

Products for HSALNG0135516 Gene

Sources for HSALNG0135516 Gene