Aliases for HSALNG0123133 Gene

Subcategory (RNA class) for HSALNG0123133 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for HSALNG0123133 Gene

  • HSALNG0123133 164

No data available for External Ids for HSALNG0123133 Gene

Summaries for HSALNG0123133 Gene

GeneCards Summary for HSALNG0123133 Gene

HSALNG0123133 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0123133 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0123133 Gene

Genomics for HSALNG0123133 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0123133 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J002160 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +6.2 6219 13.7 ARHGAP35 SP1 HNRNPL GATAD2A CTCF PRDM10 ZNF629 TFE3 SIX5 LEF1 DOT1L CIRBP GADD45B LOC100288123 AP3D1 TCF3 DAZAP1 ZNF77 SF3A2 ENSG00000267317
GH19J002175 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 -2.9 -2941 2.2 PKNOX1 ZNF600 ZNF189 POLR2A FOS DACH1 NCOA3 CREB1 IZUMO4 AP3D1 HSALNG0123133 DOT1L ENSG00000267122 SF3A2
GH19J002181 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -8.2 -8242 2.4 ZNF143 IKZF2 TRIM22 ZNF600 EED SIN3A ARID3A RELB RUNX3 GATAD2B PLEKHJ1 IZUMO4 AP3D1 KLF16 HSALNG0123133 DOT1L ENSG00000267122 SF3A2
GH19J002184 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.2 -13241 5.2 IKZF2 EED RELB RUNX3 TCF12 FOS RBM22 NR2F2 NBN HDGF SF3A2 AMH TCF3 MIR1227 LOC100288123 DAZAP1 ZNF77 CIRBP SPPL2B ENSG00000267283
GH19J002178 Enhancer 0.6 Ensembl dbSUPER 0.4 -5.2 -5242 0.4 ZIC2 RBM22 POLR2A HSALNG0123133 AP3D1 DOT1L ENSG00000267122 SF3A2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0123133 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0123133 Gene

Genomic Locations for HSALNG0123133 Gene
chr19:2,173,008-2,173,959
(GRCh38/hg38)
Size:
952 bases
Orientation:
Minus strand

Genomic View for HSALNG0123133 Gene

Genes around HSALNG0123133 on UCSC Golden Path with GeneCards custom track
HSALNG0123133 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

HSALNG0123133 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0123133 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0123133 Gene

Proteins for HSALNG0123133 Gene

Post-translational modifications for HSALNG0123133 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0123133 Gene

Domains & Families for HSALNG0123133 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0123133 Gene

Function for HSALNG0123133 Gene

Phenotypes From GWAS Catalog for HSALNG0123133 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0123133 Gene

Localization for HSALNG0123133 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0123133 Gene

Pathways & Interactions for HSALNG0123133 Gene

PathCards logo

SuperPathways for HSALNG0123133 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0123133 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0123133 Gene

Drugs & Compounds for HSALNG0123133 Gene

No Compound Related Data Available

Transcripts for HSALNG0123133 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0123133 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000E9276A_9606 lncRNA 549 1

LncBook: HSALNT0254390,

HSALNG0123133 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0123133 Gene

No ASD Table

Relevant External Links for HSALNG0123133 Gene

GeneLoc Exon Structure for
HSALNG0123133

No data available for mRNA/cDNA for HSALNG0123133 Gene

Expression for HSALNG0123133 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0123133 Gene

Orthologs for HSALNG0123133 Gene

No data available for Orthologs and Evolution for HSALNG0123133 Gene

Paralogs for HSALNG0123133 Gene

No data available for Paralogs for HSALNG0123133 Gene

Variants for HSALNG0123133 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0123133 Gene

Disorders for HSALNG0123133 Gene

No disorders were found for HSALNG0123133 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0123133 Gene

Publications for HSALNG0123133 Gene

No publications were found for HSALNG0123133 Gene.

No data available for Mastermind for HSALNG0123133 Gene

Products for HSALNG0123133 Gene

Sources for HSALNG0123133 Gene