Aliases for HSALNG0122433 Gene

Data sources for HSALNG0122433 Gene:

RNA type for HSALNG0122433 Gene

lncRNA

Aliases for HSALNG0122433 Gene

No data available for External Ids for HSALNG0122433 Gene

Summaries for HSALNG0122433 Gene

GeneCards Summary for HSALNG0122433 Gene

HSALNG0122433 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0122433 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0122433 Gene

Genomics for HSALNG0122433 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0122433 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J074417 Enhancer 0.5 Ensembl CraniofacialAtlas 250.7 +0.1 94 1 HLF EGR2 HSALNG0122433 lnc-FAM69C-3 HSALNG0122437-002 LINC01922 DIPK1C C18orf63
GH18J074416 Enhancer 0.3 Ensembl CraniofacialAtlas 250.7 +1.3 1294 0.6 HSALNG0122433 LINC01922 lnc-FAM69C-3 HSALNG0122437-002 DIPK1C C18orf63
GH18J074415 Enhancer 0.2 Ensembl 250.7 +2.0 1976 0.4 HSALNG0122433 HSALNG0122437-002 LINC01922 lnc-FAM69C-3 DIPK1C C18orf63
GH18J074395 Enhancer 0.7 ENCODE CraniofacialAtlas 0.4 +20.7 20703 1.5 FOXA2 RXRA PRDM6 HNF4A MAX SP1 GABPA HSALNG0122435 lnc-C18orf63-2 HSALNG0122433 DIPK1C C18orf63
GH18J074368 Enhancer 0.9 ENCODE CraniofacialAtlas 0.3 +47.5 47508 2.2 ATF3 YY1 RXRA SAP130 DMAP1 GABPB1 JUND FOXP1 ZNF205 ZBTB40 CNDP1 CYB5A RF00017-2433 piR-59907-012 HSALNG0122433 C18orf63 DIPK1C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0122433 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0122433 Gene

Latest Assembly
chr18:74,297,320-74,417,177
(GRCh38/hg38)
Size:
119,858 bases
Orientation:
Minus strand

Genomic View for HSALNG0122433 Gene

Genes around HSALNG0122433 on UCSC Golden Path with GeneCards custom track
HSALNG0122433 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0122433 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0122433 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0122433 Gene

Proteins for HSALNG0122433 Gene

Post-translational modifications for HSALNG0122433 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0122433 Gene

Domains & Families for HSALNG0122433 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0122433 Gene

Function for HSALNG0122433 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0122433 Gene

Localization for HSALNG0122433 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0122433 Gene

Pathways & Interactions for HSALNG0122433 Gene

PathCards logo

SuperPathways for HSALNG0122433 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0122433 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0122433 Gene

Drugs & Compounds for HSALNG0122433 Gene

No Compound Related Data Available

Transcripts for HSALNG0122433 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0122433 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0001BFAA64_9606 lncRNA 1211 1

LncBook: HSALNT0253080,

URS0001BF2B58_9606 lncRNA 1181 1

LncBook: HSALNT0253081,

URS0001BEFF9A_9606 lncRNA 947 1

LncBook: HSALNT0253082,

URS0000EB4052_9606 lncRNA 825 1

LncBook: HSALNT0253085,

URS0000E930AF_9606 lncRNA 716 1

LncBook: HSALNT0253084,

HSALNG0122433 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0122433 Gene

No ASD Table

Relevant External Links for HSALNG0122433 Gene

GeneLoc Exon Structure for
HSALNG0122433

No data available for mRNA/cDNA for HSALNG0122433 Gene

Expression for HSALNG0122433 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0122433 Gene

Orthologs for HSALNG0122433 Gene

No data available for Orthologs and Evolution for HSALNG0122433 Gene

Paralogs for HSALNG0122433 Gene

No data available for Paralogs for HSALNG0122433 Gene

Variants for HSALNG0122433 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0122433 Gene

Disorders for HSALNG0122433 Gene

No disorders were found for HSALNG0122433 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0122433 Gene

Publications for HSALNG0122433 Gene

No publications were found for HSALNG0122433 Gene.

No data available for Mastermind for HSALNG0122433 Gene

Products for HSALNG0122433 Gene

Sources for HSALNG0122433 Gene