Aliases for HSALNG0121662 Gene

Data sources for HSALNG0121662 Gene:

RNA type for HSALNG0121662 Gene

lncRNA

Aliases for HSALNG0121662 Gene

No data available for External Ids for HSALNG0121662 Gene

Summaries for HSALNG0121662 Gene

GeneCards Summary for HSALNG0121662 Gene

HSALNG0121662 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0121662 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0121662 Gene

Genomics for HSALNG0121662 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0121662 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J054763 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -4.5 -4543 6.9 CEBPA ATF3 JUND YY1 CEBPB FOXA1 HOMEZ THAP11 FOXA2 KDM6A POLI HSALNG0121662 lnc-DYNAP-2 RAB27B CCDC68
GH18J054774 Enhancer 1 ENCODE dbSUPER 0.4 +5.1 5121 3.4 JUND ZNF580 ATF2 CEBPB DEK FEZF1 ZEB1 CTCF MAX EP300 POLI HSALNG0121662 RAB27B piR-48325-079 CCDC68
GH18J054827 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE CraniofacialAtlas 0.2 +58.5 58490 3.5 IKZF1 ZNF600 ZNF580 ZIC2 CEBPB FEZF1 SIX4 ZNF341 MAX ZNF217 RAB27B CCDC68 POLI piR-48325-079 HSALNG0121662
GH18J054805 Enhancer 0.9 Ensembl ENCODE 0.3 +35.2 35209 2.4 NCOR1 JUND ZNF592 RXRA ATF1 SMARCA4 MAX TCF12 NR2F6 TEAD4 RAB27B POLI HSALNG0121662 piR-48325-079 CCDC68
GH18J054822 Enhancer 1 FANTOM5 Ensembl ENCODE 0.2 +52.1 52094 1.8 CEBPB MAX EP300 PRDM1 RFX5 SMC3 STAT3 TBP TCF7L2 JUND RAB27B POLI piR-48325-079 HSALNG0121662 CCDC68
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0121662 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0121662 Gene

Latest Assembly
chr18:54,770,992-54,776,100
(GRCh38/hg38)
Size:
5,109 bases
Orientation:
Plus strand

Genomic View for HSALNG0121662 Gene

Genes around HSALNG0121662 on UCSC Golden Path with GeneCards custom track
HSALNG0121662 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0121662 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0121662 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0121662 Gene

Proteins for HSALNG0121662 Gene

Post-translational modifications for HSALNG0121662 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0121662 Gene

Domains & Families for HSALNG0121662 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0121662 Gene

Function for HSALNG0121662 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0121662 Gene

Localization for HSALNG0121662 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0121662 Gene

Pathways & Interactions for HSALNG0121662 Gene

PathCards logo

SuperPathways for HSALNG0121662 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0121662 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0121662 Gene

Drugs & Compounds for HSALNG0121662 Gene

No Compound Related Data Available

Transcripts for HSALNG0121662 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0121662 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0001BCAA71_9606 lncRNA 1487 1

LncBook: HSALNT0251465,

HSALNG0121662 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0121662 Gene

No ASD Table

Relevant External Links for HSALNG0121662 Gene

GeneLoc Exon Structure for
HSALNG0121662

No data available for mRNA/cDNA for HSALNG0121662 Gene

Expression for HSALNG0121662 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0121662 Gene

Orthologs for HSALNG0121662 Gene

No data available for Orthologs and Evolution for HSALNG0121662 Gene

Paralogs for HSALNG0121662 Gene

No data available for Paralogs for HSALNG0121662 Gene

Variants for HSALNG0121662 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0121662 Gene

Disorders for HSALNG0121662 Gene

No disorders were found for HSALNG0121662 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0121662 Gene

Publications for HSALNG0121662 Gene

No publications were found for HSALNG0121662 Gene.

No data available for Mastermind for HSALNG0121662 Gene

Products for HSALNG0121662 Gene

Sources for HSALNG0121662 Gene