Aliases for HSALNG0120725 Gene

Data sources for HSALNG0120725 Gene:

RNA type for HSALNG0120725 Gene

lncRNA

Aliases for HSALNG0120725 Gene

No data available for External Ids for HSALNG0120725 Gene

Summaries for HSALNG0120725 Gene

GeneCards Summary for HSALNG0120725 Gene

HSALNG0120725 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0120725 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0120725 Gene

Genomics for HSALNG0120725 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0120725 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J031261 Enhancer 0.6 Ensembl ENCODE 250.7 +0.3 265 1.7 FOXA2 EBF1 BATF JUNB EED FOXA3 HSALNG0120725 DSC2 HSALNG0120724 piR-57133-275 DSG1 DSC1
GH18J031260 Enhancer 0.2 Ensembl 250.7 +1.8 1848 0.4 HSALNG0120725 DSG1 DSC2 HSALNG0120724 piR-57133-275 DSC1
GH18J031240 Promoter/Enhancer 1.7 EPDnew FANTOM5 ENCODE dbSUPER 0.4 +18.9 18934 5.9 ZNF592 CEBPA JUND CHD4 MXD4 CEBPB KLF11 TRIM22 ZFP64 HOMEZ DSG1 DSC2 piR-57133-275 LOC105372049 HSALNG0120725 lnc-DSG1-8 DSC1
GH18J031247 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +13.9 13871 4 CEBPB EP300 PRDM6 BHLHE40 SPI1 JUNB TRIM28 HLF CREM ZNF512 DSC2 DSG1 HSALNG0120725 piR-57133-275 LOC105372049 lnc-DSG1-8 DSC1
GH18J031255 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 +6.3 6333 1.6 BATF JUNB DSC2 DSG1 HSALNG0120725 piR-57133-275 LOC105372049 lnc-DSG1-8 DSC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0120725 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0120725 Gene

Latest Assembly
chr18:31,259,480-31,262,449
(GRCh38/hg38)
Size:
2,970 bases
Orientation:
Minus strand

Genomic View for HSALNG0120725 Gene

Genes around HSALNG0120725 on UCSC Golden Path with GeneCards custom track
HSALNG0120725 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0120725 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0120725 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0120725 Gene

Proteins for HSALNG0120725 Gene

Post-translational modifications for HSALNG0120725 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0120725 Gene

Domains & Families for HSALNG0120725 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0120725 Gene

Function for HSALNG0120725 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0120725 Gene

Localization for HSALNG0120725 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0120725 Gene

Pathways & Interactions for HSALNG0120725 Gene

PathCards logo

SuperPathways for HSALNG0120725 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0120725 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0120725 Gene

Drugs & Compounds for HSALNG0120725 Gene

No Compound Related Data Available

Transcripts for HSALNG0120725 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0120725 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0001BDFE6C_9606 lncRNA 2970 1

LncBook: HSALNT0249587,

HSALNG0120725 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0120725 Gene

No ASD Table

Relevant External Links for HSALNG0120725 Gene

GeneLoc Exon Structure for
HSALNG0120725

No data available for mRNA/cDNA for HSALNG0120725 Gene

Expression for HSALNG0120725 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0120725 Gene

Orthologs for HSALNG0120725 Gene

No data available for Orthologs and Evolution for HSALNG0120725 Gene

Paralogs for HSALNG0120725 Gene

No data available for Paralogs for HSALNG0120725 Gene

Variants for HSALNG0120725 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0120725 Gene

Disorders for HSALNG0120725 Gene

No disorders were found for HSALNG0120725 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0120725 Gene

Publications for HSALNG0120725 Gene

No publications were found for HSALNG0120725 Gene.

No data available for Mastermind for HSALNG0120725 Gene

Products for HSALNG0120725 Gene

Sources for HSALNG0120725 Gene