Aliases for HSALNG0120721-002 Gene

Data sources for HSALNG0120721-002 Gene:

RNA type for HSALNG0120721-002 Gene

lncRNA

Aliases for HSALNG0120721-002 Gene

No data available for External Ids for HSALNG0120721-002 Gene

Summaries for HSALNG0120721-002 Gene

GeneCards Summary for HSALNG0120721-002 Gene

HSALNG0120721-002 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0120721-002 Gene



  • Search for HSALNG0120721-002 at DataMed
  • Search for HSALNG0120721-002 at HumanCyc

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0120721-002 Gene

Genomics for HSALNG0120721-002 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0120721-002 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J031202 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 250.7 -1.0 -1027 7.4 IKZF1 ZNF600 ZNF580 CEBPA ZNF10 NFIC ZIC2 BCL11A FEZF1 ZNF639 HSALNG0120721-001 HSALNG0120721-002 DSC2 RNF138 DSC1 DSC3 DSG1 DSG3 DSG2 HSALNG0120722
GH18J031197 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +6.0 5982 3.4 NFIC ZNF217 ZNF513 CTBP1 PRDM6 PTBP1 GATA3 TCF7L2 SPI1 FOXA1 lnc-DSG1-8 HSALNG0120721-002 DSC1 DSG1
GH18J031192 Enhancer 0.3 Ensembl 0.4 +11.9 11882 0.8 NFE2 TRIM28 lnc-DSG1-8 HSALNG0120721-002 DSC1 DSG1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0120721-002 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0120721-002 Gene

Latest Assembly
chr18:31,203,529-31,204,883
(GRCh38/hg38)
Size:
1,355 bases
Orientation:
Minus strand

Genomic View for HSALNG0120721-002 Gene

Genes around HSALNG0120721-002 on UCSC Golden Path with GeneCards custom track
HSALNG0120721-002 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0120721-002 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0120721-002 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0120721-002 Gene

Proteins for HSALNG0120721-002 Gene

Post-translational modifications for HSALNG0120721-002 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0120721-002 Gene

Domains & Families for HSALNG0120721-002 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0120721-002 Gene

Function for HSALNG0120721-002 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0120721-002 Gene

Localization for HSALNG0120721-002 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0120721-002 Gene

Pathways & Interactions for HSALNG0120721-002 Gene

PathCards logo

SuperPathways for HSALNG0120721-002 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0120721-002 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0120721-002 Gene

Drugs & Compounds for HSALNG0120721-002 Gene

No Compound Related Data Available

Transcripts for HSALNG0120721-002 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0120721-002 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000E9C610_9606 lncRNA 1355 1

LncBook: HSALNT0249577,

URS0001BD901B_9606 lncRNA 1354 1

LncBook: HSALNT0249577,

HSALNG0120721-002 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0120721-002 Gene

No ASD Table

Relevant External Links for HSALNG0120721-002 Gene

GeneLoc Exon Structure for
HSALNG0120721-002

No data available for mRNA/cDNA for HSALNG0120721-002 Gene

Expression for HSALNG0120721-002 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0120721-002 Gene

Orthologs for HSALNG0120721-002 Gene

No data available for Orthologs and Evolution for HSALNG0120721-002 Gene

Paralogs for HSALNG0120721-002 Gene

No data available for Paralogs for HSALNG0120721-002 Gene

Variants for HSALNG0120721-002 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0120721-002 Gene

Disorders for HSALNG0120721-002 Gene

No disorders were found for HSALNG0120721-002 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0120721-002 Gene

Publications for HSALNG0120721-002 Gene

No publications were found for HSALNG0120721-002 Gene.

No data available for Mastermind for HSALNG0120721-002 Gene

Products for HSALNG0120721-002 Gene

Sources for HSALNG0120721-002 Gene