Aliases for HSALNG0118708 Gene

Data sources for HSALNG0118708 Gene:

Subcategory (RNA class) for HSALNG0118708 Gene

lncRNA

Aliases for HSALNG0118708 Gene

No data available for External Ids for HSALNG0118708 Gene

Summaries for HSALNG0118708 Gene

GeneCards Summary for HSALNG0118708 Gene

HSALNG0118708 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0118708 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0118708 Gene

Genomics for HSALNG0118708 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0118708 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J075104 Enhancer 1.2 Ensembl ENCODE dbSUPER 250.7 +0.4 381 1.7 ZSCAN16 FEZF1 CTCF ZIC2 ZNF610 REST ZNF639 MAX KLF7 ZNF341 HSALNG0118708 UNK ENSG00000266980 GGA3 NUP85 SLC16A5 NT5C ENSG00000267342 MYO15B NAT9
GH17J075103 Enhancer 0.5 dbSUPER 250.7 +2.0 1950 1 EBF1 POLR2A PRDM4 ZNF121 HIC1 HSALNG0118708 ARMC7 HSALNG0118709 SLC16A5
GH17J075085 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +14.4 14448 11.9 CHD2 TBP CEBPA MNT IKZF1 SMAD5 ETS1 ZFP64 MBD2 ZNF217 SLC16A5 ENSG00000206713 HSALNG0118709 UNK NUP85 NT5C GGA3 ENSG00000266980 ENSG00000267342 NAT9
GH17J075102 Enhancer 1 Ensembl ENCODE 0.7 +3.7 3743 1.6 MNT BHLHE40 TRIM22 ELF1 ZEB2 EBF1 SPI1 SMARCA4 MAX FOXK2 MRPL58 CDR2L SMIM6 HSALNG0118708 ARMC7 SLC16A5 HSALNG0118709
GH17J075097 Enhancer 0.2 dbSUPER 0.4 +8.0 7967 0.4 CDR2L HSALNG0118708 HSALNG0118709 ARMC7 SLC16A5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0118708 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0118708 Gene

Latest Assembly
chr17:75,089,073-75,105,944
(GRCh38/hg38)
Size:
16,872 bases
Orientation:
Minus strand

Genomic View for HSALNG0118708 Gene

Genes around HSALNG0118708 on UCSC Golden Path with GeneCards custom track
HSALNG0118708 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0118708 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0118708 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0118708 Gene

Proteins for HSALNG0118708 Gene

Post-translational modifications for HSALNG0118708 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0118708 Gene

Domains & Families for HSALNG0118708 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0118708 Gene

Function for HSALNG0118708 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0118708 Gene

Localization for HSALNG0118708 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0118708 Gene

Pathways & Interactions for HSALNG0118708 Gene

PathCards logo

SuperPathways for HSALNG0118708 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0118708 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0118708 Gene

Drugs & Compounds for HSALNG0118708 Gene

No Compound Related Data Available

Transcripts for HSALNG0118708 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0118708 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0001BE9FBD_9606 lncRNA 1236 1

LncBook: HSALNT0245228,

HSALNG0118708 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0118708 Gene

No ASD Table

Relevant External Links for HSALNG0118708 Gene

GeneLoc Exon Structure for
HSALNG0118708

No data available for mRNA/cDNA for HSALNG0118708 Gene

Expression for HSALNG0118708 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0118708 Gene

Orthologs for HSALNG0118708 Gene

No data available for Orthologs and Evolution for HSALNG0118708 Gene

Paralogs for HSALNG0118708 Gene

No data available for Paralogs for HSALNG0118708 Gene

Variants for HSALNG0118708 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0118708 Gene

Disorders for HSALNG0118708 Gene

No disorders were found for HSALNG0118708 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0118708 Gene

Publications for HSALNG0118708 Gene

No publications were found for HSALNG0118708 Gene.

No data available for Mastermind for HSALNG0118708 Gene

Products for HSALNG0118708 Gene

Sources for HSALNG0118708 Gene