Aliases for HSALNG0112880 Gene

Data sources for HSALNG0112880 Gene:

RNA type for HSALNG0112880 Gene

lncRNA

Aliases for HSALNG0112880 Gene

No data available for External Ids for HSALNG0112880 Gene

Summaries for HSALNG0112880 Gene

GeneCards Summary for HSALNG0112880 Gene

HSALNG0112880 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0112880 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0112880 Gene

Genomics for HSALNG0112880 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0112880 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J079037 Enhancer 0.9 Ensembl ENCODE 0.4 +21.7 21665 0.8 CEBPA YY1 ZNF217 FOXA2 CTBP1 RXRA RARA THRB BCL6 FOXA1 piR-30791-037 ENSG00000280274 HSALNG0112880 NONHSAG020064.2 MAF WWOX
GH16J079050 Enhancer 0.6 Ensembl 0.3 +34.0 33965 0.2 ZNF217 MBD2 CTBP1 SMARCE1 DPF2 NCOA3 ZNF687 MNT RAD21 EP300 piR-30791-037 ENSG00000280274 HSALNG0112880 NONHSAG020064.2 MAF WWOX
GH16J079055 Enhancer 0.5 Ensembl 0.3 +34.4 34364 0.2 ZNF217 MBD2 DPF2 HLF MNT TARDBP piR-30791-037 ENSG00000280274 HSALNG0112880 NONHSAG020064.2 MAF WWOX
GH16J079042 Enhancer 0.4 Ensembl 0.3 +27.2 27164 2.2 RXRA HNF4A SP1 piR-30791-037 ENSG00000280274 HSALNG0112880 NONHSAG020064.2 MAF WWOX
GH16J079046 Enhancer 0.3 Ensembl 0.3 +30.7 30665 0.8 CTCF piR-30791-037 NONHSAG020064.2 ENSG00000280274 HSALNG0112880 MAF WWOX
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0112880 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0112880 Gene

Latest Assembly
chr16:79,016,136-79,017,429
(GRCh38/hg38)
Size:
1,294 bases
Orientation:
Plus strand

Genomic View for HSALNG0112880 Gene

Genes around HSALNG0112880 on UCSC Golden Path with GeneCards custom track
HSALNG0112880 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0112880 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0112880 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0112880 Gene

Proteins for HSALNG0112880 Gene

Post-translational modifications for HSALNG0112880 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0112880 Gene

Domains & Families for HSALNG0112880 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0112880 Gene

Function for HSALNG0112880 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0112880 Gene

Localization for HSALNG0112880 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0112880 Gene

Pathways & Interactions for HSALNG0112880 Gene

PathCards logo

SuperPathways for HSALNG0112880 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0112880 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0112880 Gene

Drugs & Compounds for HSALNG0112880 Gene

No Compound Related Data Available

Transcripts for HSALNG0112880 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0112880 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0001BF1BD2_9606 lncRNA 1294 1

LncBook: HSALNT0233882,

HSALNG0112880 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0112880 Gene

No ASD Table

Relevant External Links for HSALNG0112880 Gene

GeneLoc Exon Structure for
HSALNG0112880

No data available for mRNA/cDNA for HSALNG0112880 Gene

Expression for HSALNG0112880 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0112880 Gene

Orthologs for HSALNG0112880 Gene

No data available for Orthologs and Evolution for HSALNG0112880 Gene

Paralogs for HSALNG0112880 Gene

No data available for Paralogs for HSALNG0112880 Gene

Variants for HSALNG0112880 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0112880 Gene

Disorders for HSALNG0112880 Gene

No disorders were found for HSALNG0112880 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0112880 Gene

Publications for HSALNG0112880 Gene

No publications were found for HSALNG0112880 Gene.

No data available for Mastermind for HSALNG0112880 Gene

Products for HSALNG0112880 Gene

Sources for HSALNG0112880 Gene