Aliases for HSALNG0103560 Gene

Data sources for HSALNG0103560 Gene:

Subcategory (RNA class) for HSALNG0103560 Gene

lncRNA

Aliases for HSALNG0103560 Gene

No data available for External Ids for HSALNG0103560 Gene

Summaries for HSALNG0103560 Gene

GeneCards Summary for HSALNG0103560 Gene

HSALNG0103560 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0103560 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0103560 Gene

Genomics for HSALNG0103560 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0103560 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J097408 Enhancer 1 FANTOM5 Ensembl ENCODE 250.7 -0.3 -330 3.2 ZIC2 BHLHE40 BATF STAT5A IKZF1 GLIS1 JUNB ZNF629 TARDBP IKZF2 HSALNG0103560 HSALNG0103558 VRK1
GH14J097412 Enhancer 1 VISTA UCNEbase ENCODE 0.7 +4.6 4591 1.7 SIN3A CTCF POU5F1 ARID3A EZH2 NANOG POLR2A RAD21 HSALNG0103561 HSALNG0103560 VRK1
GH14J097411 Enhancer 0.7 Ensembl 0.7 +2.4 2401 1.9 CTCF TRIM22 BATF IKZF1 TCF7 BMI1 GLIS1 JUNB ZBED1 ARID3A HSALNG0103560 HSALNG0103561 VRK1
GH14J097392 Enhancer 0.8 Ensembl ENCODE 0.4 -15.8 -15753 1.4 TRIM22 BHLHE40 IKZF1 BMI1 TCF12 ATF7 TARDBP IKZF2 MTA2 POLR2A HSALNG0103558 HSALNG0103560 VRK1
GH14J097386 Enhancer 0.7 Ensembl 0.3 -21.2 -21230 2.2 BCL11A IRF4 BATF IKZF1 TCF7 NR2F1 JUNB TCF12 ATF7 SPI1 ENSG00000260806 HSALNG0103558 HSALNG0103560 VRK1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0103560 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0103560 Gene

Latest Assembly
chr14:97,409,131-97,410,237
(GRCh38/hg38)
Size:
1,107 bases
Orientation:
Plus strand

Genomic View for HSALNG0103560 Gene

Genes around HSALNG0103560 on UCSC Golden Path with GeneCards custom track
HSALNG0103560 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0103560 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0103560 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0103560 Gene

Proteins for HSALNG0103560 Gene

Post-translational modifications for HSALNG0103560 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0103560 Gene

Domains & Families for HSALNG0103560 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0103560 Gene

Function for HSALNG0103560 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0103560 Gene

Localization for HSALNG0103560 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0103560 Gene

Pathways & Interactions for HSALNG0103560 Gene

PathCards logo

SuperPathways for HSALNG0103560 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0103560 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0103560 Gene

Drugs & Compounds for HSALNG0103560 Gene

No Compound Related Data Available

Transcripts for HSALNG0103560 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0103560 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0001BECAE7_9606 lncRNA 1004 1

LncBook: HSALNT0215426,

HSALNG0103560 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0103560 Gene

No ASD Table

Relevant External Links for HSALNG0103560 Gene

GeneLoc Exon Structure for
HSALNG0103560

No data available for mRNA/cDNA for HSALNG0103560 Gene

Expression for HSALNG0103560 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0103560 Gene

Orthologs for HSALNG0103560 Gene

No data available for Orthologs and Evolution for HSALNG0103560 Gene

Paralogs for HSALNG0103560 Gene

No data available for Paralogs for HSALNG0103560 Gene

Variants for HSALNG0103560 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0103560 Gene

Disorders for HSALNG0103560 Gene

No disorders were found for HSALNG0103560 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0103560 Gene

Publications for HSALNG0103560 Gene

No publications were found for HSALNG0103560 Gene.

No data available for Mastermind for HSALNG0103560 Gene

Products for HSALNG0103560 Gene

Sources for HSALNG0103560 Gene