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Aliases for HSALNG0089858 Gene
Data sources for HSALNG0089858 Gene:
Subcategory (RNA class) for HSALNG0089858 Gene
lncRNA
Aliases for HSALNG0089858 Gene
- HSALNG0089858 (LncBook)
No data available for External Ids for HSALNG0089858 Gene
Summaries for HSALNG0089858 Gene
GeneCards Summary for HSALNG0089858 Gene
HSALNG0089858 is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for HSALNG0089858 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0089858 Gene
Genomics for HSALNG0089858 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for HSALNG0089858 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH12J024080 | Enhancer | 1.5 | VISTA UCNEbase Ensembl ENCODE | 250.7 | +1.2 | 1210 | 1.8 | THAP11 ZNF511 KMT2B PRDM6 ZNF362 ZNF384 ZNF18 IKZF5 KDM3A L3MBTL2 | HSALNG0089858 HSALNG0089859 SOX5 lnc-SOX5-5 | |
| GH12J024078 | Enhancer | 1.1 | Ensembl ENCODE | 250.7 | -1.9 | -1854 | 1.4 | FEZF1 CEBPA ZEB1 HOMEZ KDM6A THAP11 FOXA2 ZNF639 MAFF SMAD4 | HSALNG0089858 L13714-077 SOX5 lnc-SOX5-5 | |
| GH12J024070 | Enhancer | 1.1 | Ensembl CraniofacialAtlas | 0.4 | -10.5 | -10515 | 1 | ZSCAN16 FEZF1 CEBPA FOXA1 HOMEZ KDM6A ZNF610 THAP11 FOXA2 ZNF511 | L13714-077 HSALNG0089858 SOX5 lnc-SOX5-5 | |
| GH12J024066 | Enhancer | 0.7 | Ensembl | 0.4 | -13.5 | -13514 | 1 | FEZF1 PRDM6 ZFP37 JUND ZNF189 BCL6B ZNF366 KLF10 PKNOX1 ZEB2 | L13714-077 HSALNG0089858 SOX5 lnc-SOX5-5 | |
| GH12J024083 | Enhancer | 0.3 | Ensembl | 0.7 | +3.1 | 3086 | 0.6 | MAFK IKZF1 | HSALNG0089858 HSALNG0089859 SOX5 lnc-SOX5-5 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around HSALNG0089858 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for HSALNG0089858 Gene
Latest Assembly
- chr12:24,080,615-24,114,248
- (GRCh38/hg38)
- Size:
- 33,634 bases
- Orientation:
- Plus strand
Genomic View for HSALNG0089858 Gene
Genes around HSALNG0089858 on UCSC Golden Path with GeneCards custom track
HSALNG0089858 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
HSALNG0089858 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0089858 Gene
Proteins for HSALNG0089858 Gene
Post-translational modifications for HSALNG0089858 Gene
No Post-translational modifications
No data available for DME Specific Peptides for HSALNG0089858 Gene
Domains & Families for HSALNG0089858 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0089858 Gene
Function for HSALNG0089858 Gene
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0089858 Gene
Localization for HSALNG0089858 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0089858 Gene
Transcripts for HSALNG0089858 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0089858 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS0001BF442F_9606 | lncRNA | 704 | 1 |
LncBook: HSALNT0186627, |
HSALNG0089858 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
CRISPR products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for HSALNG0089858 Gene
- GeneLoc Exon Structure for
- HSALNG0089858
No data available for mRNA/cDNA for HSALNG0089858 Gene
Expression for HSALNG0089858 Gene
No Expression Related Data Available
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0089858 Gene
Orthologs for HSALNG0089858 Gene
No data available for Orthologs and Evolution for HSALNG0089858 Gene
Paralogs for HSALNG0089858 Gene
No data available for Paralogs for HSALNG0089858 Gene
Variants for HSALNG0089858 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0089858 Gene
Disorders for HSALNG0089858 Gene
No disorders were found for HSALNG0089858 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0089858 Gene
Publications for HSALNG0089858 Gene
No publications were found for HSALNG0089858 Gene.
No data available for Mastermind for HSALNG0089858 Gene
Products for HSALNG0089858 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HSALNG0089858
- Origene Custom Protein Services for HSALNG0089858
- Browse OriGene Inhibitory RNA Products For HSALNG0089858
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for HSALNG0089858
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For HSALNG0089858
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
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- Browse ELISA Kits
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for HSALNG0089858
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for HSALNG0089858
- Search GeneCopoeia for miRNA 3'UTR Target clone products for HSALNG0089858
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for HSALNG0089858
Sources for HSALNG0089858 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB