Aliases for HSALNG0087117 Gene

Data sources for HSALNG0087117 Gene:

RNA type for HSALNG0087117 Gene

lncRNA

Aliases for HSALNG0087117 Gene

Previous GeneCards Identifiers for HSALNG0087117 Gene

  • GC11P111544
  • GC11P111577
  • GC11P111585

No data available for External Ids for HSALNG0087117 Gene

Summaries for HSALNG0087117 Gene

GeneCards Summary for HSALNG0087117 Gene

HSALNG0087117 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0087117 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0087117 Gene

Genomics for HSALNG0087117 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0087117 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J111539 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 +0.9 855 3.3 ZIC2 ZNF341 KLF9 SP2 KLF16 BHLHE40 TAF1 GLIS1 ZNF398 ZFX LAYN HSALNG0087116 HSALNG0087117 PPP2R1B NONHSAG009596.2 SIK2
GH11J111548 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +9.2 9221 1.8 JUND GATA2 POLR2A SPI1 CHD2 EP300 ENSG00000254980 BTG4 HOATZ MIR34B MIR34C LAYN NONHSAG009596.2 HSALNG0087117 SIK2
GH11J111553 Enhancer 0.7 ENCODE dbSUPER 0.4 +16.2 16193 5.4 JUND NFE2 CTCF MAFK BHLHE40 POLR2A ZNF143 EP300 FOS CEBPB NONHSAG009596.2 SIK2 ENSG00000254980 POU2AF1 ENSG00000255093 BTG4 HOATZ MIR34B MIR34C ALG9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0087117 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0087117 Gene

Latest Assembly
chr11:111,540,280-111,555,212
(GRCh38/hg38)
Size:
14,933 bases
Orientation:
Plus strand

Genomic View for HSALNG0087117 Gene

Genes around HSALNG0087117 on UCSC Golden Path with GeneCards custom track
HSALNG0087117 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0087117 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0087117 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0087117 Gene

Proteins for HSALNG0087117 Gene

Post-translational modifications for HSALNG0087117 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0087117 Gene

Domains & Families for HSALNG0087117 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0087117 Gene

Function for HSALNG0087117 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0087117 Gene

Localization for HSALNG0087117 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0087117 Gene

Pathways & Interactions for HSALNG0087117 Gene

PathCards logo

SuperPathways for HSALNG0087117 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0087117 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0087117 Gene

Drugs & Compounds for HSALNG0087117 Gene

No Compound Related Data Available

Transcripts for HSALNG0087117 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0087117 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000E9B6F5_9606 lncRNA 574 1

LncBook: HSALNT0181062,

URS0001BE5592_9606 lncRNA 574 1

LncBook: HSALNT0181062,

URS0000E9F822_9606 lncRNA 546 1

LncBook: HSALNT0181061,

HSALNG0087117 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0087117 Gene

No ASD Table

Relevant External Links for HSALNG0087117 Gene

GeneLoc Exon Structure for
HSALNG0087117

No data available for mRNA/cDNA for HSALNG0087117 Gene

Expression for HSALNG0087117 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0087117 Gene

Orthologs for HSALNG0087117 Gene

No data available for Orthologs and Evolution for HSALNG0087117 Gene

Paralogs for HSALNG0087117 Gene

No data available for Paralogs for HSALNG0087117 Gene

Variants for HSALNG0087117 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0087117 Gene

Disorders for HSALNG0087117 Gene

No disorders were found for HSALNG0087117 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0087117 Gene

Publications for HSALNG0087117 Gene

No publications were found for HSALNG0087117 Gene.

No data available for Mastermind for HSALNG0087117 Gene

Products for HSALNG0087117 Gene

Sources for HSALNG0087117 Gene