Aliases for HSALNG0078579 Gene

Subcategory (RNA class) for HSALNG0078579 Gene

lncRNA

Number of RNA Genes sources:

1 / 14

Aliases for HSALNG0078579 Gene

  • HSALNG0078579 167

No data available for External Ids for HSALNG0078579 Gene

Summaries for HSALNG0078579 Gene

GeneCards Summary for HSALNG0078579 Gene

HSALNG0078579 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0078579 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0078579 Gene

Genomics for HSALNG0078579 Gene

GeneHancer (GH) Regulatory Elements for HSALNG0078579 Gene

Promoters and enhancers for HSALNG0078579 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J069445 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +1.7 1746 9 CTCF TCF12 SP1 JUND FOS ZFX ZIC2 ZBTB10 FOXA1 NR3C1 TSPAN15 HSALNG0078579 DDX50 CCAR1 DDX21 FAM241B VPS26A TACR2 AIFM2 piR-31199-034
GH10J069436 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +12.5 12493 4.4 ZNF217 CLOCK RFX1 EP300 CTBP1 ESRRA DEK MYC SMARCC1 MBD2 TSPAN15 FAM241B HK1 ENSG00000231748 piR-31199-034 HSALNG0078579
GH10J069454 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -14.0 -13962 21.8 ZNF217 NRF1 JUND REST KLF4 RELA CTBP1 NR2F2 ZNF263 ZKSCAN1 TSPAN15 HK1 HSALNG0078579 piR-59515-001
GH10J069477 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -28.8 -28789 5.1 ZNF423 ZNF623 RBM25 NR2F2 WT1 POLR2A SPI1 FOXP2 RXRA SMARCA4 TSPAN15 FAM241B ENSG00000231748 HK1 piR-59515-001 HSALNG0078579
GH10J069434 Enhancer 0.4 dbSUPER 0.4 +16.7 16712 0.4 ZNF184 ZNF407 ZBTB33 MZF1 ZNF316 ATP5MC1P7 piR-31199-034 lnc-TACR2-3 TSPAN15 HSALNG0078579
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0078579 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HSALNG0078579 Gene

Genomic Locations for HSALNG0078579 Gene
chr10:69,442,344-69,451,339
(GRCh38/hg38)
Size:
8,996 bases
Orientation:
Minus strand

Genomic View for HSALNG0078579 Gene

Genes around HSALNG0078579 on UCSC Golden Path with GeneCards custom track

HSALNG0078579 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0078579 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0078579 Gene

Proteins for HSALNG0078579 Gene

Post-translational modifications for HSALNG0078579 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0078579 Gene

Domains & Families for HSALNG0078579 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0078579 Gene

Function for HSALNG0078579 Gene

Phenotypes From GWAS Catalog for HSALNG0078579 Gene

miRNA for HSALNG0078579 Gene

miRTarBase miRNAs that target HSALNG0078579

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for HSALNG0078579 Gene

Localization for HSALNG0078579 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0078579 Gene

Pathways & Interactions for HSALNG0078579 Gene

PathCards logo

SuperPathways for HSALNG0078579 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for HSALNG0078579 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0078579 Gene

Drugs & Compounds for HSALNG0078579 Gene

No Compound Related Data Available

Transcripts for HSALNG0078579 Gene

mRNA/cDNA for HSALNG0078579 Gene

1 RNACentral transcripts :
1 LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0078579 Gene

No ASD Table

Relevant External Links for HSALNG0078579 Gene

GeneLoc Exon Structure for
HSALNG0078579

Expression for HSALNG0078579 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0078579 Gene

Orthologs for HSALNG0078579 Gene

No data available for Orthologs and Evolution for HSALNG0078579 Gene

Paralogs for HSALNG0078579 Gene

No data available for Paralogs for HSALNG0078579 Gene

Variants for HSALNG0078579 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0078579 Gene

Disorders for HSALNG0078579 Gene

No disorders were found for HSALNG0078579 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0078579 Gene

Publications for HSALNG0078579 Gene

No publications were found for HSALNG0078579 Gene.

No data available for Mastermind for HSALNG0078579 Gene

Products for HSALNG0078579 Gene

Sources for HSALNG0078579 Gene