Aliases for HSALNG0038196 Gene

Data sources for HSALNG0038196 Gene:

Subcategory (RNA class) for HSALNG0038196 Gene

lncRNA

Aliases for HSALNG0038196 Gene

No data available for External Ids for HSALNG0038196 Gene

Summaries for HSALNG0038196 Gene

GeneCards Summary for HSALNG0038196 Gene

HSALNG0038196 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0038196 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0038196 Gene

Genomics for HSALNG0038196 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0038196 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J159360 Enhancer 0.7 Ensembl ENCODE 250.7 +0.3 300 1.3 RAD21 MAFK JUND BHLHE40 POLR2A EP300 FOS HSALNG0038196 ENSG00000248552 lnc-C4orf45-3 RAPGEF2
GH04J159357 Enhancer 0.6 Ensembl ENCODE 250.7 -1.8 -1750 1.7 MAFK JUND ZNF652 EP300 CEBPB FOS HSALNG0038196 HSALNG0038194 RAPGEF2
GH04J159359 Enhancer 0.3 UCNEbase 250.7 -0.5 -497 0.3 HSALNG0038196 HSALNG0038194 RAPGEF2
GH04J159348 Enhancer 0.5 Ensembl 0.4 -11.2 -11193 0.6 MNT IKZF1 BHLHE40 ZNF316 NFE2 MAFG BACH1 MYC EMSY HSALNG0038194 HSALNG0038196 RAPGEF2
GH04J159367 Enhancer 0.5 Ensembl 0.4 +6.9 6907 1.2 SMAD4 SOX5 MEIS2 SOX13 CEBPB RAPGEF2 ENSG00000248552 HSALNG0038196 lnc-C4orf45-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0038196 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0038196 Gene

Latest Assembly
chr4:159,360,494-159,367,429
(GRCh38/hg38)
Size:
6,936 bases
Orientation:
Plus strand

Genomic View for HSALNG0038196 Gene

Genes around HSALNG0038196 on UCSC Golden Path with GeneCards custom track
HSALNG0038196 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0038196 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0038196 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0038196 Gene

Proteins for HSALNG0038196 Gene

Post-translational modifications for HSALNG0038196 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0038196 Gene

Domains & Families for HSALNG0038196 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0038196 Gene

Function for HSALNG0038196 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0038196 Gene

Localization for HSALNG0038196 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0038196 Gene

Pathways & Interactions for HSALNG0038196 Gene

PathCards logo

SuperPathways for HSALNG0038196 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0038196 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0038196 Gene

Drugs & Compounds for HSALNG0038196 Gene

No Compound Related Data Available

Transcripts for HSALNG0038196 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0038196 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0001BD8D2D_9606 lncRNA 933 1

LncBook: HSALNT0080113,

HSALNG0038196 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0038196 Gene

No ASD Table

Relevant External Links for HSALNG0038196 Gene

GeneLoc Exon Structure for
HSALNG0038196

No data available for mRNA/cDNA for HSALNG0038196 Gene

Expression for HSALNG0038196 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0038196 Gene

Orthologs for HSALNG0038196 Gene

No data available for Orthologs and Evolution for HSALNG0038196 Gene

Paralogs for HSALNG0038196 Gene

No data available for Paralogs for HSALNG0038196 Gene

Variants for HSALNG0038196 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0038196 Gene

Disorders for HSALNG0038196 Gene

No disorders were found for HSALNG0038196 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0038196 Gene

Publications for HSALNG0038196 Gene

No publications were found for HSALNG0038196 Gene.

No data available for Mastermind for HSALNG0038196 Gene

Products for HSALNG0038196 Gene

Sources for HSALNG0038196 Gene