Aliases for HSALNG0015490 Gene

Data sources for HSALNG0015490 Gene:

Subcategory (RNA class) for HSALNG0015490 Gene

lncRNA

Aliases for HSALNG0015490 Gene

No data available for External Ids for HSALNG0015490 Gene

Summaries for HSALNG0015490 Gene

GeneCards Summary for HSALNG0015490 Gene

HSALNG0015490 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0015490 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0015490 Gene

Genomics for HSALNG0015490 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0015490 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J064665 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 250.7 +1.2 1222 3.6 SP1 MXD4 HOMEZ KDM6A REST FOXA2 SAP130 MIER3 ETV4 RARA HSALNG0015490 RPS10P9 SERTAD2 AFTPH lnc-RAB1A-12
GH02J064669 Enhancer 1 ENCODE dbSUPER 0.7 +3.9 3855 0.2 CEBPA HOMEZ THAP11 ZNF511 FOXA2 SMAD4 SAP130 ZEB2 MIER3 ETV4 SERTAD2 HSALNG0015490 lnc-RAB1A-12 AFTPH
GH02J064677 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +10.0 9993 2.4 FOXA2 FOSL1 PRDM6 JUND NFE2 BATF ZBTB48 EGR1 BHLHE40 ZNF664 SERTAD2 HSALNG0015490 lnc-RAB1A-12 AFTPH
GH02J064678 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +13.7 13743 2.7 RXRA FOXA2 ZBTB33 PRDM6 BHLHE40 JUND HNF4A CEBPG ZNF148 REST SERTAD2 HSALNG0015490 lnc-RAB1A-12 AFTPH
GH02J064685 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +20.4 20394 2 FEZF1 CEBPA HOMEZ CEBPB FOXA2 SMAD4 SAP130 RXRA CTBP1 RARA SERTAD2 PELI1 HSALNG0015490 lnc-RAB1A-12 AFTPH
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0015490 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0015490 Gene

Latest Assembly
chr2:64,665,607-64,666,064
(GRCh38/hg38)
Size:
458 bases
Orientation:
Plus strand

Genomic View for HSALNG0015490 Gene

Genes around HSALNG0015490 on UCSC Golden Path with GeneCards custom track
HSALNG0015490 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0015490 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0015490 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0015490 Gene

Proteins for HSALNG0015490 Gene

Post-translational modifications for HSALNG0015490 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0015490 Gene

Domains & Families for HSALNG0015490 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0015490 Gene

Function for HSALNG0015490 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0015490 Gene

Localization for HSALNG0015490 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0015490 Gene

Pathways & Interactions for HSALNG0015490 Gene

PathCards logo

SuperPathways for HSALNG0015490 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0015490 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0015490 Gene

Drugs & Compounds for HSALNG0015490 Gene

No Compound Related Data Available

Transcripts for HSALNG0015490 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0015490 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EBAECF_9606 lncRNA 458 1

LncBook: HSALNT0032730,

HSALNG0015490 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0015490 Gene

No ASD Table

Relevant External Links for HSALNG0015490 Gene

GeneLoc Exon Structure for
HSALNG0015490

No data available for mRNA/cDNA for HSALNG0015490 Gene

Expression for HSALNG0015490 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0015490 Gene

Orthologs for HSALNG0015490 Gene

No data available for Orthologs and Evolution for HSALNG0015490 Gene

Paralogs for HSALNG0015490 Gene

No data available for Paralogs for HSALNG0015490 Gene

Variants for HSALNG0015490 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0015490 Gene

Disorders for HSALNG0015490 Gene

No disorders were found for HSALNG0015490 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0015490 Gene

Publications for HSALNG0015490 Gene

No publications were found for HSALNG0015490 Gene.

No data available for Mastermind for HSALNG0015490 Gene

Products for HSALNG0015490 Gene

Sources for HSALNG0015490 Gene