Aliases for HSALNG0011109 Gene

Data sources for HSALNG0011109 Gene:

RNA type for HSALNG0011109 Gene

lncRNA

Aliases for HSALNG0011109 Gene

No data available for External Ids for HSALNG0011109 Gene

Summaries for HSALNG0011109 Gene

GeneCards Summary for HSALNG0011109 Gene

HSALNG0011109 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0011109 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0011109 Gene

Genomics for HSALNG0011109 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0011109 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J226810 Enhancer 0.8 FANTOM5 Ensembl ENCODE dbSUPER 250.7 +0.8 837 1.1 PKNOX1 HSALNG0011109 ITPKB COQ8A PSEN2 STUM HSALNG0011111-001 ENSG00000288674
GH01J226808 Enhancer 0.2 Ensembl 250.7 -1.1 -1105 0.4 HSALNG0011109 ITPKB COQ8A RF00017-440 PSEN2 ENSG00000288674
GH01J226809 Enhancer 0.2 Ensembl 250.7 -0.1 -105 0.4 HSALNG0011109 ITPKB COQ8A RF00017-440 PSEN2 ENSG00000288674
GH01J226813 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.5 8504 10 ZNF600 IKZF1 JUND ATF2 ZNF10 ZSCAN16 BRCA1 NFIC ZIC2 CEBPB HSALNG0011111-002 piR-52471-001 PSEN2 ITPKB STUM COQ8A HSALNG0011111-001 HSALNG0011109 ENSG00000288674
GH01J226804 Enhancer 0.9 Ensembl 0.7 -3.9 -3905 3.6 MYC NCOR1 IKZF1 ZNF592 ZIC2 NFIC NONO REST HES1 BHLHE40 ITPKB STUM PSEN2 HSALNG0011109 RF00017-440 ENSG00000288674
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0011109 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0011109 Gene

Latest Assembly
chr1:226,809,506-226,814,477
(GRCh38/hg38)
Size:
4,972 bases
Orientation:
Plus strand

Genomic View for HSALNG0011109 Gene

Genes around HSALNG0011109 on UCSC Golden Path with GeneCards custom track
HSALNG0011109 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0011109 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0011109 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0011109 Gene

Proteins for HSALNG0011109 Gene

Post-translational modifications for HSALNG0011109 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0011109 Gene

Domains & Families for HSALNG0011109 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0011109 Gene

Function for HSALNG0011109 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0011109 Gene

Localization for HSALNG0011109 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0011109 Gene

Pathways & Interactions for HSALNG0011109 Gene

PathCards logo

SuperPathways for HSALNG0011109 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0011109 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0011109 Gene

Drugs & Compounds for HSALNG0011109 Gene

No Compound Related Data Available

Transcripts for HSALNG0011109 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0011109 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000E9A6F2_9606 lncRNA 1938 1

LncBook: HSALNT0023145,

URS0001BD6725_9606 lncRNA 1938 1

LncBook: HSALNT0023145,

URS0001BD85B3_9606 lncRNA 853 1

LncBook: HSALNT0023143,

URS0001BE222E_9606 lncRNA 430 1

LncBook: HSALNT0023144,

HSALNG0011109 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0011109 Gene

No ASD Table

Relevant External Links for HSALNG0011109 Gene

GeneLoc Exon Structure for
HSALNG0011109

No data available for mRNA/cDNA for HSALNG0011109 Gene

Expression for HSALNG0011109 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0011109 Gene

Orthologs for HSALNG0011109 Gene

No data available for Orthologs and Evolution for HSALNG0011109 Gene

Paralogs for HSALNG0011109 Gene

No data available for Paralogs for HSALNG0011109 Gene

Variants for HSALNG0011109 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0011109 Gene

Disorders for HSALNG0011109 Gene

No disorders were found for HSALNG0011109 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0011109 Gene

Publications for HSALNG0011109 Gene

No publications were found for HSALNG0011109 Gene.

No data available for Mastermind for HSALNG0011109 Gene

Products for HSALNG0011109 Gene

Sources for HSALNG0011109 Gene