Aliases for HSALNG0010770 Gene

Data sources for HSALNG0010770 Gene:

RNA type for HSALNG0010770 Gene

lncRNA

Aliases for HSALNG0010770 Gene

No data available for External Ids for HSALNG0010770 Gene

Summaries for HSALNG0010770 Gene

GeneCards Summary for HSALNG0010770 Gene

HSALNG0010770 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0010770 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0010770 Gene

Genomics for HSALNG0010770 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0010770 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J220893 Enhancer 0.3 Ensembl 250.7 +1.6 1552 0.2 SP1 EZH2 HSALNG0010770 HLX HSALNG0010768 lnc-HLX-2 DUSP10
GH01J220905 Enhancer 0.8 Ensembl 0.4 -11.8 -11830 1.4 CEBPA ATF3 YY1 MAX ZNF513 FOXA2 CTBP1 SMAD4 RXRA RARA HLX HSALNG0010770 lnc-HLX-2 LOC105372930 DUSP10
GH01J220928 Enhancer 1 FANTOM5 Ensembl 0.3 -33.3 -33348 2 NCOR1 NFIC ZIC2 HES1 BHLHE40 FEZF1 TAL1 RUNX1 ZNF843 SKIL HLX LINC01352 HSALNG0010770 lnc-HLX-2 LOC105372930 DUSP10
GH01J220890 Enhancer 0.4 Ensembl 0.7 +4.2 4152 0.6 CBX8 EZH2 RNF2 POLR2A HLX HSALNG0010770 HSALNG0010768 lnc-HLX-2 DUSP10
GH01J220954 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.2 -64.0 -64048 9.8 JUND ATF3 YY1 CEBPB EP300 FOXA2 RXRA TAL1 ZNF316 ZBTB33 HLX LINC01352 LOC105372930 HSALNG0010770 lnc-HLX-2 DUSP10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0010770 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0010770 Gene

Latest Assembly
chr1:220,891,039-220,895,053
(GRCh38/hg38)
Size:
4,015 bases
Orientation:
Minus strand

Genomic View for HSALNG0010770 Gene

Genes around HSALNG0010770 on UCSC Golden Path with GeneCards custom track
HSALNG0010770 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0010770 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0010770 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0010770 Gene

Proteins for HSALNG0010770 Gene

Post-translational modifications for HSALNG0010770 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0010770 Gene

Domains & Families for HSALNG0010770 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0010770 Gene

Function for HSALNG0010770 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0010770 Gene

Localization for HSALNG0010770 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0010770 Gene

Pathways & Interactions for HSALNG0010770 Gene

PathCards logo

SuperPathways for HSALNG0010770 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0010770 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0010770 Gene

Drugs & Compounds for HSALNG0010770 Gene

No Compound Related Data Available

Transcripts for HSALNG0010770 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0010770 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0001BE9AA9_9606 lncRNA 2436 1

LncBook: HSALNT0022324,

URS0001BDB88D_9606 lncRNA 1949 1

LncBook: HSALNT0022323,

URS0001BD578E_9606 lncRNA 1321 1

LncBook: HSALNT0022326,

HSALNG0010770 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0010770 Gene

No ASD Table

Relevant External Links for HSALNG0010770 Gene

GeneLoc Exon Structure for
HSALNG0010770

No data available for mRNA/cDNA for HSALNG0010770 Gene

Expression for HSALNG0010770 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0010770 Gene

Orthologs for HSALNG0010770 Gene

No data available for Orthologs and Evolution for HSALNG0010770 Gene

Paralogs for HSALNG0010770 Gene

No data available for Paralogs for HSALNG0010770 Gene

Variants for HSALNG0010770 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0010770 Gene

Disorders for HSALNG0010770 Gene

No disorders were found for HSALNG0010770 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0010770 Gene

Publications for HSALNG0010770 Gene

No publications were found for HSALNG0010770 Gene.

No data available for Mastermind for HSALNG0010770 Gene

Products for HSALNG0010770 Gene

Sources for HSALNG0010770 Gene