Aliases for HSALNG0006321 Gene

Data sources for HSALNG0006321 Gene:

Subcategory (RNA class) for HSALNG0006321 Gene

lncRNA

Aliases for HSALNG0006321 Gene

No data available for External Ids for HSALNG0006321 Gene

Summaries for HSALNG0006321 Gene

GeneCards Summary for HSALNG0006321 Gene

HSALNG0006321 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0006321 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0006321 Gene

Genomics for HSALNG0006321 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0006321 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J116321 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +4.1 4141 11.4 FEZF1 FOXA2 MAFF SMAD4 SAP130 TAL1 RARA ZNF843 BCL6 ZNF316 ATP1A1 HSALNG0006321 HSALNG0006318 ENSG00000287217 LOC105378920 MAB21L3
GH01J116318 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 -2.8 -2771 1.4 NFE2 SMARCA4 FOXK2 NRF1 ATF2 ESRRA MEIS2 ZNF639 ARID1B NR2C1 piR-52079-017 HSALNG0006321 LOC105378920 ENSG00000287217 HSALNG0006318 ATP1A1 MAB21L3
GH01J116333 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +13.6 13616 4.3 CEBPA IKZF1 ZIC2 ZEB2 TAL1 RXRA ETV4 GABPB1 CTBP1 SIN3A HSALNG0006318 ENSG00000287217 LOC105378920 ATP1A1 HSALNG0006321 MAB21L3
GH01J116332 Enhancer 0.3 Ensembl dbSUPER 0.4 +10.9 10941 0.2 HSALNG0006318 ENSG00000287217 LOC105378920 HSALNG0006321 ATP1A1 MAB21L3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0006321 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0006321 Gene

Latest Assembly
chr1:116,321,760-116,332,602
(GRCh38/hg38)
Size:
10,843 bases
Orientation:
Plus strand

Genomic View for HSALNG0006321 Gene

Genes around HSALNG0006321 on UCSC Golden Path with GeneCards custom track
HSALNG0006321 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0006321 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0006321 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0006321 Gene

Proteins for HSALNG0006321 Gene

Post-translational modifications for HSALNG0006321 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0006321 Gene

Domains & Families for HSALNG0006321 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0006321 Gene

Function for HSALNG0006321 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0006321 Gene

Localization for HSALNG0006321 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0006321 Gene

Pathways & Interactions for HSALNG0006321 Gene

PathCards logo

SuperPathways for HSALNG0006321 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0006321 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0006321 Gene

Drugs & Compounds for HSALNG0006321 Gene

No Compound Related Data Available

Transcripts for HSALNG0006321 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0006321 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0001BDE50A_9606 lncRNA 3400 1

LncBook: HSALNT0013228,

HSALNG0006321 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0006321 Gene

No ASD Table

Relevant External Links for HSALNG0006321 Gene

GeneLoc Exon Structure for
HSALNG0006321

No data available for mRNA/cDNA for HSALNG0006321 Gene

Expression for HSALNG0006321 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0006321 Gene

Orthologs for HSALNG0006321 Gene

No data available for Orthologs and Evolution for HSALNG0006321 Gene

Paralogs for HSALNG0006321 Gene

No data available for Paralogs for HSALNG0006321 Gene

Variants for HSALNG0006321 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0006321 Gene

Disorders for HSALNG0006321 Gene

No disorders were found for HSALNG0006321 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0006321 Gene

Publications for HSALNG0006321 Gene

No publications were found for HSALNG0006321 Gene.

No data available for Mastermind for HSALNG0006321 Gene

Products for HSALNG0006321 Gene

Sources for HSALNG0006321 Gene