Aliases for HSALNG0005057 Gene

Data sources for HSALNG0005057 Gene:

RNA type for HSALNG0005057 Gene

lncRNA

Aliases for HSALNG0005057 Gene

No data available for External Ids for HSALNG0005057 Gene

Summaries for HSALNG0005057 Gene

GeneCards Summary for HSALNG0005057 Gene

HSALNG0005057 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0005057 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0005057 Gene

Genomics for HSALNG0005057 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0005057 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J089309 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -2.3 -2303 3.8 YY1 RXRA ZNF316 JUND NFE2 NFE2L2 BATF ELF1 HNF4A MAFG GBP1 GBP5 GBP4 GBP2 GTF2B PKN2 GBP3 ENSG00000231613 LRRC8C HSALNG0005057
GH01J089305 Enhancer 0.5 Ensembl 0.7 +3.2 3196 0.8 MAFF ZNF316 MAFK MAFG EMSY GBP5 HSALNG0005057 piR-53063-010 GBP6
GH01J089316 Enhancer 0.2 FANTOM5 0.4 -7.5 -7536 0 HSALNG0005057 ENSG00000233235 GBP5 GBP6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0005057 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0005057 Gene

Latest Assembly
chr1:89,307,836-89,309,197
(GRCh38/hg38)
Size:
1,362 bases
Orientation:
Minus strand

Genomic View for HSALNG0005057 Gene

Genes around HSALNG0005057 on UCSC Golden Path with GeneCards custom track
HSALNG0005057 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0005057 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0005057 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0005057 Gene

Proteins for HSALNG0005057 Gene

Post-translational modifications for HSALNG0005057 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0005057 Gene

Domains & Families for HSALNG0005057 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0005057 Gene

Function for HSALNG0005057 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0005057 Gene

Localization for HSALNG0005057 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0005057 Gene

Pathways & Interactions for HSALNG0005057 Gene

PathCards logo

SuperPathways for HSALNG0005057 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0005057 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0005057 Gene

Drugs & Compounds for HSALNG0005057 Gene

No Compound Related Data Available

Transcripts for HSALNG0005057 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0005057 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0001BF3526_9606 lncRNA 1126 1

LncBook: HSALNT0010288,

HSALNG0005057 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0005057 Gene

No ASD Table

Relevant External Links for HSALNG0005057 Gene

GeneLoc Exon Structure for
HSALNG0005057

No data available for mRNA/cDNA for HSALNG0005057 Gene

Expression for HSALNG0005057 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0005057 Gene

Orthologs for HSALNG0005057 Gene

No data available for Orthologs and Evolution for HSALNG0005057 Gene

Paralogs for HSALNG0005057 Gene

No data available for Paralogs for HSALNG0005057 Gene

Variants for HSALNG0005057 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0005057 Gene

Disorders for HSALNG0005057 Gene

No disorders were found for HSALNG0005057 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0005057 Gene

Publications for HSALNG0005057 Gene

No publications were found for HSALNG0005057 Gene.

No data available for Mastermind for HSALNG0005057 Gene

Products for HSALNG0005057 Gene

Sources for HSALNG0005057 Gene