Aliases for HSALNG0005043 Gene

Data sources for HSALNG0005043 Gene:

RNA type for HSALNG0005043 Gene

lncRNA

Aliases for HSALNG0005043 Gene

No data available for External Ids for HSALNG0005043 Gene

Summaries for HSALNG0005043 Gene

GeneCards Summary for HSALNG0005043 Gene

HSALNG0005043 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0005043 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0005043 Gene

Genomics for HSALNG0005043 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0005043 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J088990 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 -0.8 -755 4 SP1 IKZF1 MYC ZNF600 JUND ZNF580 POLR2A ZNF10 NFIC YY1 KYAT3 HSALNG0005043 RBMXL1 GBP3 PKN2 ELOCP19 GTF2B GBP5 GBP6 ENSG00000235308
GH01J089001 Enhancer 0.6 FANTOM5 Ensembl 0.4 +9.1 9114 2.4 SMARCA4 RNF2 lnc-PKN2-5 GBP3 GBP7 GBP5 PTGES3P1 LRRC8B GTF2B GBP2 HSALNG0005043 RBMXL1
GH01J088998 Enhancer 0.6 ENCODE 0.4 +5.6 5581 0.2 ZNF654 CTCF REST TRIM22 RAD21 SMC3 ARID3A ZNF660 RXRA ZNF335 lnc-PKN2-5 HSALNG0005043 RBMXL1 KYAT3 GBP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0005043 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0005043 Gene

Latest Assembly
chr1:88,993,312-88,994,212
(GRCh38/hg38)
Size:
901 bases
Orientation:
Plus strand

Genomic View for HSALNG0005043 Gene

Genes around HSALNG0005043 on UCSC Golden Path with GeneCards custom track
HSALNG0005043 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0005043 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0005043 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0005043 Gene

Proteins for HSALNG0005043 Gene

Post-translational modifications for HSALNG0005043 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0005043 Gene

Domains & Families for HSALNG0005043 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0005043 Gene

Function for HSALNG0005043 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0005043 Gene

Localization for HSALNG0005043 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0005043 Gene

Pathways & Interactions for HSALNG0005043 Gene

PathCards logo

SuperPathways for HSALNG0005043 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0005043 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0005043 Gene

Drugs & Compounds for HSALNG0005043 Gene

No Compound Related Data Available

Transcripts for HSALNG0005043 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0005043 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000EA7CF6_9606 lncRNA 696 1

LncBook: HSALNT0010251,

URS0001BF186C_9606 lncRNA 695 1

LncBook: HSALNT0010251,

URS0001BE066A_9606 lncRNA 284 1

LncBook: HSALNT0010252,

HSALNG0005043 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0005043 Gene

No ASD Table

Relevant External Links for HSALNG0005043 Gene

GeneLoc Exon Structure for
HSALNG0005043

No data available for mRNA/cDNA for HSALNG0005043 Gene

Expression for HSALNG0005043 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0005043 Gene

Orthologs for HSALNG0005043 Gene

No data available for Orthologs and Evolution for HSALNG0005043 Gene

Paralogs for HSALNG0005043 Gene

No data available for Paralogs for HSALNG0005043 Gene

Variants for HSALNG0005043 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0005043 Gene

Disorders for HSALNG0005043 Gene

No disorders were found for HSALNG0005043 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0005043 Gene

Publications for HSALNG0005043 Gene

No publications were found for HSALNG0005043 Gene.

No data available for Mastermind for HSALNG0005043 Gene

Products for HSALNG0005043 Gene

Sources for HSALNG0005043 Gene