Aliases for HSALNG0004036-001 Gene

Data sources for HSALNG0004036-001 Gene:

RNA type for HSALNG0004036-001 Gene

lncRNA

Aliases for HSALNG0004036-001 Gene

No data available for External Ids for HSALNG0004036-001 Gene

Summaries for HSALNG0004036-001 Gene

GeneCards Summary for HSALNG0004036-001 Gene

HSALNG0004036-001 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0004036-001 Gene



  • Search for HSALNG0004036-001 at DataMed
  • Search for HSALNG0004036-001 at HumanCyc

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0004036-001 Gene

Genomics for HSALNG0004036-001 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0004036-001 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J061593 Enhancer 0.3 Ensembl 250.7 -1.8 -1795 1.4 ZNF600 HSALNG0004036-001 HSALNG0004036-002 RNU6-1177P lnc-PATJ-1 TM2D1 NFIA
GH01J061591 Enhancer 0.2 Ensembl 250.7 +0.6 605 0.2 HSALNG0004036-001 HSALNG0004036-002 ENSG00000287224 RNU6-1177P TM2D1 NFIA
GH01J061587 Enhancer 1.4 VISTA Ensembl ENCODE CraniofacialAtlas 0.7 +3.0 3025 3.4 ZNF654 ZNF10 REST DEK TRIM22 CTCF SIN3A KLF9 RAD21 SMC3 ENSG00000287224 NFIA-AS2 RNU6-1177P HSALNG0004036-001 HSALNG0004036-002 piR-59297-030 TM2D1 NFIA
GH01J061605 Enhancer 0.8 FANTOM5 Ensembl ENCODE 0.4 -13.0 -13012 4.6 NFE2 SPI1 GATA2 ZNF16 ZNF24 USP1 NFIA-AS2 HSALNG0004036-001 HSALNG0004036-002 lnc-PATJ-1 TM2D1 NFIA
GH01J061616 Enhancer 0.8 Ensembl ENCODE 0.4 -24.2 -24172 0.9 HES1 RXRA JUND RAD51 NR2F6 MEIS2 DPF2 ARID1B SMARCE1 ATF3 lnc-PATJ-1 HSALNG0004036-001 HSALNG0004036-002 TM2D1 NFIA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0004036-001 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0004036-001 Gene

Latest Assembly
chr1:61,590,023-61,592,506
(GRCh38/hg38)
Size:
2,484 bases
Orientation:
Minus strand

Genomic View for HSALNG0004036-001 Gene

Genes around HSALNG0004036-001 on UCSC Golden Path with GeneCards custom track
HSALNG0004036-001 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0004036-001 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0004036-001 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0004036-001 Gene

Proteins for HSALNG0004036-001 Gene

Post-translational modifications for HSALNG0004036-001 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0004036-001 Gene

Domains & Families for HSALNG0004036-001 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0004036-001 Gene

Function for HSALNG0004036-001 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0004036-001 Gene

Localization for HSALNG0004036-001 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0004036-001 Gene

Pathways & Interactions for HSALNG0004036-001 Gene

PathCards logo

SuperPathways for HSALNG0004036-001 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0004036-001 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0004036-001 Gene

Drugs & Compounds for HSALNG0004036-001 Gene

No Compound Related Data Available

Transcripts for HSALNG0004036-001 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0004036-001 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000EB911A_9606 lncRNA 2352 1

LncBook: HSALNT0007951,

HSALNG0004036-001 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0004036-001 Gene

No ASD Table

Relevant External Links for HSALNG0004036-001 Gene

GeneLoc Exon Structure for
HSALNG0004036-001

No data available for mRNA/cDNA for HSALNG0004036-001 Gene

Expression for HSALNG0004036-001 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0004036-001 Gene

Orthologs for HSALNG0004036-001 Gene

No data available for Orthologs and Evolution for HSALNG0004036-001 Gene

Paralogs for HSALNG0004036-001 Gene

No data available for Paralogs for HSALNG0004036-001 Gene

Variants for HSALNG0004036-001 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0004036-001 Gene

Disorders for HSALNG0004036-001 Gene

No disorders were found for HSALNG0004036-001 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0004036-001 Gene

Publications for HSALNG0004036-001 Gene

No publications were found for HSALNG0004036-001 Gene.

No data available for Mastermind for HSALNG0004036-001 Gene

Products for HSALNG0004036-001 Gene

Sources for HSALNG0004036-001 Gene