Aliases for HSALNG0003810 Gene

Data sources for HSALNG0003810 Gene:

RNA type for HSALNG0003810 Gene

lncRNA

Aliases for HSALNG0003810 Gene

No data available for External Ids for HSALNG0003810 Gene

Summaries for HSALNG0003810 Gene

GeneCards Summary for HSALNG0003810 Gene

HSALNG0003810 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0003810 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0003810 Gene

Genomics for HSALNG0003810 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0003810 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J054965 Enhancer 0.9 FANTOM5 Ensembl ENCODE 250.7 +0.3 296 3.8 USF2 SPI1 ETV1 POLR2A RAD51 MEIS2 PKNOX1 FOS RUNX3 SREBF1 HSALNG0003810 TMEM61 HSALNG0003811 DHCR24
GH01J054970 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 +5.2 5196 1.6 SP1 ZNF207 JUND BCL11A ZNF592 TRIM22 BHLHE40 MNT MAX EP300 TMEM61 HSALNG0003810 HSALNG0003811 DHCR24
GH01J054972 Enhancer 0.8 Ensembl ENCODE 0.4 +6.9 6945 1.8 CEBPA CEBPB CTCF SIN3A RAD21 SMC3 STAT3 FOXA1 ZNF664 TFAP4 TMEM61 HSALNG0003810 HSALNG0003811 DHCR24
GH01J054977 Enhancer 0.4 Ensembl 0.4 +11.6 11596 1.6 ZNF600 USF1 EP300 TMEM61 HSALNG0003811 LOC105378736 HSALNG0003810 DHCR24
GH01J054975 Enhancer 0.3 Ensembl 0.4 +9.5 9496 0.6 ZNF10 TMEM61 HSALNG0003811 LOC105378736 HSALNG0003810 DHCR24
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0003810 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0003810 Gene

Latest Assembly
chr1:54,966,205-54,974,912
(GRCh38/hg38)
Size:
8,708 bases
Orientation:
Plus strand

Genomic View for HSALNG0003810 Gene

Genes around HSALNG0003810 on UCSC Golden Path with GeneCards custom track
HSALNG0003810 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0003810 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0003810 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0003810 Gene

Proteins for HSALNG0003810 Gene

Post-translational modifications for HSALNG0003810 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0003810 Gene

Domains & Families for HSALNG0003810 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0003810 Gene

Function for HSALNG0003810 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0003810 Gene

Localization for HSALNG0003810 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0003810 Gene

Pathways & Interactions for HSALNG0003810 Gene

PathCards logo

SuperPathways for HSALNG0003810 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0003810 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0003810 Gene

Drugs & Compounds for HSALNG0003810 Gene

No Compound Related Data Available

Transcripts for HSALNG0003810 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0003810 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0001BDD54B_9606 lncRNA 2359 1

LncBook: HSALNT0007102,

URS0000E96602_9606 lncRNA 1004 1

LncBook: HSALNT0007103,

URS0001BFA294_9606 lncRNA 1003 1

LncBook: HSALNT0007103,

URS0001BE6607_9606 lncRNA 212 1

LncBook: HSALNT0007104,

HSALNG0003810 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0003810 Gene

No ASD Table

Relevant External Links for HSALNG0003810 Gene

GeneLoc Exon Structure for
HSALNG0003810

No data available for mRNA/cDNA for HSALNG0003810 Gene

Expression for HSALNG0003810 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0003810 Gene

Orthologs for HSALNG0003810 Gene

No data available for Orthologs and Evolution for HSALNG0003810 Gene

Paralogs for HSALNG0003810 Gene

No data available for Paralogs for HSALNG0003810 Gene

Variants for HSALNG0003810 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0003810 Gene

Disorders for HSALNG0003810 Gene

No disorders were found for HSALNG0003810 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0003810 Gene

Publications for HSALNG0003810 Gene

No publications were found for HSALNG0003810 Gene.

No data available for Mastermind for HSALNG0003810 Gene

Products for HSALNG0003810 Gene

Sources for HSALNG0003810 Gene