Aliases for HSALNG0000684 Gene

Data sources for HSALNG0000684 Gene:

RNA type for HSALNG0000684 Gene

lncRNA

Aliases for HSALNG0000684 Gene

No data available for External Ids for HSALNG0000684 Gene

Summaries for HSALNG0000684 Gene

GeneCards Summary for HSALNG0000684 Gene

HSALNG0000684 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for HSALNG0000684 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for HSALNG0000684 Gene

Genomics for HSALNG0000684 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for HSALNG0000684 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J009162 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 250.7 +0.1 130 5.1 SP1 NCOR1 IKZF1 JUND ZNF580 ATF2 ATF3 ZNF10 NFIC ZIC2 HSALNG0000684 GPR157 H6PD LNCTAM34A SLC2A5 SPSB1 MIR34A MIR34AHG HSALNG0000677
GH01J009172 Enhancer 0.8 ENCODE 0.4 +7.8 7848 0.2 CEBPA FOXA1 FOXA2 KDM6A RXRA SMAD4 SAP130 RARA TEAD3 THRB HSALNG0000684 MIR34A LNCTAM34A MIR34AHG GPR157 H6PD HSALNG0000677
GH01J009160 Enhancer 0.4 dbSUPER 0.7 -3.1 -3111 1.1 ZNF217 L3MBTL2 EP300 GPR157 HSALNG0000684 HSALNG0000683 MIR34A MIR34AHG H6PD HSALNG0000677
GH01J009167 Enhancer 0.4 dbSUPER 0.7 +3.3 3343 1 ZNF18 EGR2 ZFHX2 GPR157 HSALNG0000684 MIR34A LNCTAM34A MIR34AHG H6PD HSALNG0000677
GH01J009155 Enhancer 0.5 Ensembl 0.4 -8.7 -8668 0.4 MAFF ZNF316 MAFK MAFG EMSY GPR157 H6PD HSALNG0000683 HSALNG0000681-001 HSALNG0000684 MIR34A MIR34AHG HSALNG0000677
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around HSALNG0000684 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for HSALNG0000684 Gene

Latest Assembly
chr1:9,164,469-9,169,370
(GRCh38/hg38)
Size:
4,902 bases
Orientation:
Plus strand

Genomic View for HSALNG0000684 Gene

Genes around HSALNG0000684 on UCSC Golden Path with GeneCards custom track
HSALNG0000684 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

HSALNG0000684 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSALNG0000684 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for HSALNG0000684 Gene

Proteins for HSALNG0000684 Gene

Post-translational modifications for HSALNG0000684 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSALNG0000684 Gene

Domains & Families for HSALNG0000684 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for HSALNG0000684 Gene

Function for HSALNG0000684 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSALNG0000684 Gene

Localization for HSALNG0000684 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSALNG0000684 Gene

Pathways & Interactions for HSALNG0000684 Gene

PathCards logo

SuperPathways for HSALNG0000684 Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSALNG0000684 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for HSALNG0000684 Gene

Drugs & Compounds for HSALNG0000684 Gene

No Compound Related Data Available

Transcripts for HSALNG0000684 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for HSALNG0000684 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0001BEE1AC_9606 lncRNA 2703 1

LncBook: HSALNT0001414,

HSALNG0000684 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for HSALNG0000684 Gene

No ASD Table

Relevant External Links for HSALNG0000684 Gene

GeneLoc Exon Structure for
HSALNG0000684

No data available for mRNA/cDNA for HSALNG0000684 Gene

Expression for HSALNG0000684 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSALNG0000684 Gene

Orthologs for HSALNG0000684 Gene

No data available for Orthologs and Evolution for HSALNG0000684 Gene

Paralogs for HSALNG0000684 Gene

No data available for Paralogs for HSALNG0000684 Gene

Variants for HSALNG0000684 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HSALNG0000684 Gene

Disorders for HSALNG0000684 Gene

No disorders were found for HSALNG0000684 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSALNG0000684 Gene

Publications for HSALNG0000684 Gene

No publications were found for HSALNG0000684 Gene.

No data available for Mastermind for HSALNG0000684 Gene

Products for HSALNG0000684 Gene

Sources for HSALNG0000684 Gene